Erika Ganda

Assistant Professor of Food Animal Microbiomes

Erika Ganda

Research Summary

Developing practical ways to leverage the microbiome to improve food safety and improve food production animals' production efficiency.

Huck Graduate Students

Huck Affiliations


Publication Tags

Milk Farms Cattle Dna Mastitis Microbiota Cows Dairies Cephalosporins Dairy Cows Endometritis Food Escherichia Coli Poultry Vaccines Fluid Salmonella Enterica Immunization Animals Health Fluids Genes Microbiome Pathogens Salmonella

Most Recent Papers

Choice of Commercial DNA Extraction Method Does Not Affect 16S Sequencing Outcomes in Cloacal Swabs

Emily Van Syoc, Natália Carrillo Gaeta, Erika Ganda, Animals on p. 1372

Lactobacillus reuteri and Enterococcus faecium from Poultry Gut Reduce Mucin Adhesion and Biofilm Formation of Cephalosporin and Fluoroquinolone-Resistant Salmonella enterica

Abubakar Siddique, Sara Azim, Amjad Ali, Fazal Adnan, Maryum Arif, Muhammad Imran, Erika Ganda, Abdur Rahman, Animals on p. 3435

Draft genome sequences of 25 Salmonella enterica serovar Agona strains isolated from poultry and associated food products harbouring multiple antibiotic resistance genes

Abubakar Siddique, Nimat Ullah, Amjad Ali, Ami Patel, Terence Moore, Sophia M. Kenney, Erika Ganda, Abdur Rahman, 2022, Journal of Global Antimicrobial Resistance on p. 131-135

Global metagenomics analyses demonstrate metformin-induced changes in the gut mycobiome in subjects with type 2 diabetes

Emily Van Syoc, Connie J. Rogers, Erika Ganda, 2022, FASEB Journal

Lactobacillus reuteri and enterococcus faecium from poultry gut reduce mucin adhesion and biofilm formation of cephalosporin and fluoroquinolone-resistant salmonella enterica

Abubakar Siddique, Sara Azim, Amjad Ali, Fazal Adnan, Maryum Arif, Muhammad Imran, Erika Ganda, Abdur Rahman, 2021, Animals

DNA Extraction and Host Depletion Methods Significantly Impact and Potentially Bias Bacterial Detection in a Biological Fluid

Erika Ganda, Kristen Beck, Niina Haiminen, J Silverman, Ban Kawas, Brittany Cronk, Renee Anderson, Laura Goodman, Martin Wiedmann, 2021, mSystems

Choice of commercial dna extraction method does not affect 16s sequencing outcomes in cloacal swabs

Emily Van Syoc, Natália Carrillo Gaeta, Erika Ganda, 2021, Animals

A Cross-Sectional Study of Dairy Cattle Metagenomes Reveals Increased Antimicrobial Resistance in Animals Farmed in a Heavy Metal Contaminated Environment

Natalia Carrillo Gaeta, Emily Bean, Asha Marie Miles, Daniel Ubriaco Oliveira Gonçalves de Carvalho, Mario Augusto Reyes Alemán, Jeferson Silva Carvalho, Lilian Gregory, Erika Ganda, 2020, Frontiers in Microbiology

Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

Matthew Barden, Peter Richards-Rios, Erika Ganda, Luca Lenzi, Richard Eccles, Joseph Neary, Joanne Oultram, Georgios Oikonomou, 2020, Animal Microbiome

Complex interactions between weather, and microbial and physicochemical water quality impact the likelihood of detecting foodborne pathogens in agricultural water

Daniel Weller, Natalie Brassill, Channah Rock, Renata Ivanek, Erika Mudrak, Sherry Roof, Erika Ganda, Martin Wiedmann, 2020, Frontiers in Microbiology

Most-Cited Papers

Prepartum and postpartum rumen fluid microbiomes: characterization and correlation with production traits in dairy cows

Fabio S. Lima, Georgios Oikonomou, Svetlana F. Lima, Marcela L.S. Bicalho, Erika K. Ganda, Jose C. de Oliveira Filho, Gustavo Lorenzo, Plamen Trojacanec, Rodrigo C. Bicalho, 2015, Applied and Environmental Microbiology on p. 1327-1337

Longitudinal metagenomic profiling of bovine milk to assess the impact of intramammary treatment using a third-generation cephalosporin

Erika K. Ganda, Rafael S. Bisinotto, Svetlana F. Lima, Kristina Kronauer, Dean H. Decter, Georgios Oikonomou, Ynte H. Schukken, Rodrigo C. Bicalho, 2016, Scientific Reports

Oral administration of Faecalibacterium prausnitzii decreased the incidence of severe diarrhea and related mortality rate and increased weight gain in preweaned dairy heifers

Carla Foditsch, Richard Van Vleck Pereira, Erika Korzune Ganda, Marilia Souza Gomez, Eduardo Carvalho Marques, Thiago Santin, Rodrigo Carvalho Bicalho, 2015, PLoS One

Subcutaneous immunization with inactivated bacterial components and purified protein of Escherichia coli, Fusobacterium necrophorumand Trueperella pyogenes prevents puerperal metritis in holstein dairy cows

Vinícius Silva Machado, Marcela Luccas De Souza Bicalho, Enoch Brandão De Souza Meira, Rodolfo Rossi, Bruno Leonardo Ribeiro, Svetlana Lima, Thiago Santos, Arieli Kussler, Carla Foditsch, Erika Korzune Ganda, Georgios Oikonomou, Soon Hon Cheong, Robert Owen Gilbert, Rodrigo Carvalho Bicalho, 2014, PLoS One

The bovine colostrum microbiome and its association with clinical mastitis

Svetlana F. Lima, Andre G.V. Teixeira, Fabio S. Lima, Erika K. Ganda, Catherine H. Higgins, Georgios Oikonomou, Rodrigo C. Bicalho, 2017, Journal of Dairy Science on p. 3031-3042

Effect of trace mineral supplementation on selected minerals, energy metabolites, oxidative stress, and immune parameters and its association with uterine diseases in dairy cattle

M. L.S. Bicalho, F. S. Lima, E. K. Ganda, C. Foditsch, E. B.S. Meira, V. S. Machado, A. G.V. Teixeira, G. Oikonomou, R. O. Gilbert, R. C. Bicalho, 2014, Journal of Dairy Science on p. 4281-4295

Associations among Trueperella pyogenes, endometritis diagnosis, and pregnancy outcomes in dairy cows

M. L.S. Bicalho, F. S. Lima, V. S. Machado, E. B. Meira, E. K. Ganda, C. Foditsch, R. C. Bicalho, R. O. Gilbert, 2016, Theriogenology on p. 267-274

Evaluation of an on-farm culture system (Accumast) for fast identification of milk pathogens associated with clinical mastitis in dairy cows

Erika Korzune Ganda, Rafael Sisconeto Bisinotto, Dean Harrison Decter, Rodrigo Carvalho Bicalho, 2016, PLoS One

Normal milk microbiome is reestablished following experimental infection with Escherichia coli independent of intramammary antibiotic treatment with a third-generation cephalosporin in bovines

Erika K. Ganda, Natalia Gaeta, Anja Sipka, Brianna Pomeroy, Georgios Oikonomou, Ynte H. Schukken, Rodrigo C. Bicalho, 2017, Microbiome

Lameness prevalence and risk factors in large dairy farms in upstate New York. Model development for the prediction of claw horn disruption lesions

Carla Foditsch, Georgios Oikonomou, Vinícius Silva Machado, Marcela Luccas Bicalho, Erika Korzune Ganda, Svetlana Ferreira Lima, Rodolfo Rossi, Bruno Leonardo Ribeiro, Arieli Kussler, Rodrigo Carvalho Bicalho, 2016, PLoS One