Seogchan Kang
Professor of Plant Pathology & Environmental Microbiology

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311 Buckhout Lab
University Park, PA - sxk55@psu.edu
- 814-863-3846
Research Summary
Genetic and cellular mechanisms underpinning plant-fungal interactions with Arabidopsis thaliana and Fusarium oxysporum as a model system. Molecular genetics and comparative genomics of fungal plant pathogens. Bioinformatics.
Huck Affiliations
- Bioinformatics and Genomics
- Plant Biology
- Molecular, Cellular, and Integrative Biosciences
- Microbiome Center
- Plant Institute
- Center for Chemical Ecology
- Ecology Institute
Links
Publication Tags
Fusarium Fungi Genes Oryza Transcription Factors Immunity Growth Volatile Organic Compounds Rice Plant Health Pathogens Calcium Proteins Arabidopsis Pathogenicity Genomics Calmodulin Infections Conidiation Gene Fusarium Solani Trapping Loci Stress Response HealthMost Recent Publications
Evaluation of multi-color genetically encoded Ca2+ indicators in filamentous fungi
Hye-Seon Kim, Jungeun Kim, Aram Hwangbo, Jasper Akerboom, Loren Luger, Larry Duncan, Hokyoung Son, Kirk Czymmek, Seogchan Kang, Fungal Genetics & Biology on p. 103540
Plant-endophyte associations: Rich yet under-explored sources of novel bioactive molecules and applications
Pragya Tiwari, Seogchan Kang, Hanhong Bae, 2023, Microbiological Research
DdaCrz1, a C<sub>2</sub>H<sub>2</sub>-Type Transcription Factor, Regulates Growth, Conidiation, and Stress Resistance in the Nematode-Trapping Fungus Drechslerella dactyloides
Xiaozhou Zhao, Yani Fan, Meichun Xiang, Seogchan Kang, Shunxian Wang, Xingzhong Liu, 2022, Journal of Fungi
FUSARIUM-ID v.3.0: An Updated, Downloadable Resource for Fusarium Species Identification
Terry J. Torres-Cruz, Briana K. Whitaker, Robert H. Proctor, Kirk Broders, Imane Laraba, Hye Seon Kim, Daren W. Brown, Kerry O’Donnell, Tania L. Estrada-Rodríguez, Yong Hwan Lee, Kyeongchae Cheong, Emma C. Wallace, Chyanna T. McGee, Seogchan Kang, David M. Geiser, 2022, Plant Disease on p. 1610-1616
Genomics and Informatics, Conjoined Tools Vital for Understanding and Protecting Plant Health
Seogchan Kang, Ki Tae Kim, Jaeyoung Choi, Hyun Kim, Kyeongchae Cheong, Ananda Bandara, Yong Hwan Lee, 2022, Phytopathology on p. 981-995
Phytophthora spp. Associated with Appalachian Oak Forests and Waterways in Pennsylvania, with P. abietivora as a Pathogen of Five Native Woody Plant Species
Devin Bily, Ekaterina Nikolaeva, Tracey Olson, Seogchan Kang, 2022, Plant Disease on p. 1143-1156
A rice gene encoding glycosyl hydrolase plays contrasting roles in immunity depending on the type of pathogens
Chi Yeol Kim, Ju Young Park, Gobong Choi, Seongbeom Kim, Kieu Thi Xuan Vo, Jong Seong Jeon, Seogchan Kang, Yong Hwan Lee, 2022, Molecular Plant Pathology on p. 400-416
Phytophthora Diversity in Pennsylvania Nurseries and Greenhouses Inferred from Clinical Samples Collected over Four Decades
Devin Bily, Ekaterina Nikolaeva, Tracey Olson, Seogchan Kang, 2022, Plant Disease
Alternative splicing diversifies the transcriptome and proteome of the rice blast fungus during host infection
Jongbum Jeon, Ki Tae Kim, Jaeyoung Choi, Kyeongchae Cheong, Jaeho Ko, Gobong Choi, Hyunjun Lee, Gir Won Lee, Sook Young Park, Seongbeom Kim, Sun Tae Kim, Cheol Woo Min, Seogchan Kang, Yong Hwan Lee, 2022, RNA Biology on p. 373-385
Time-Lapse Imaging of Root Pathogenesis and Fungal Proliferation Without Physically Disrupting Roots
Hye Seon Kim, Sook Young Park, Seogchan Kang, Kirk J. Czymmek, 2022, on p. 153-170
Most-Cited Papers
Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria
Kerry O'Donnell, Alejandro P. Rooney, Robert H. Proctor, Daren W. Brown, Susan P. McCormick, Todd J. Ward, Rasmus J.N. Frandsen, Erik Lysøe, Stephen A. Rehner, Takayuki Aoki, Vincent A.R.G. Robert, Pedro W. Crous, Johannes Z. Groenewald, Seogchan Kang, David M. Geiser, 2013, Fungal Genetics and Biology on p. 20-31
DNA sequence-based identification of Fusarium: Current status and future directions
Kerry O’Donnell, Todd J. Ward, Vincent A.R.G. Robert, Pedro W. Crous, David M. Geiser, Seogchan Kang, 2015, Phytoparasitica on p. 583-595
Sniffing on microbes: Diverse roles of microbial volatile organic compounds in plant health
Vasileios Bitas, Hye Seon Kim, Joan W. Bennett, Seogchan Kang, 2013, Molecular Plant-Microbe Interactions on p. 835-843
One fungus, one name: Defining the genus Fusarium in a scientifically robust way that preserves longstanding use
David M. Geiser, Takayuki Aoki, Charles W. Bacon, Scott E. Baker, Madan K. Bhattacharyya, Mary E. Brandt, Daren W. Brown, Lester W. Burgess, Sofia Chulze, Jeffrey J. Coleman, James C. Correll, Sarah F. Covert, Pedro W. Crous, Christina A. Cuomo, G. Sybren De Hoog, Antonio Di Pietro, Wade H. Elmer, Lynn Epstein, Rasmus J.N. Frandsen, Stanley Freeman, Tatiana Gagkaeva, Anthony E. Glenn, Thomas R. Gordon, Nancy F. Gregory, Kim E. Hammond-Kosack, Linda E. Hanson, María Del Mar Jímenez-Gasco, Seogchan Kang, H. Corby Kistler, Gretchen A. Kuldau, John F. Leslie, Antonio Logrieco, Guozhong Lu, Erik Lysøe, Li Jun Ma, Susan P. McCormick, Quirico Migheli, Antonio Moretti, Françoise Munaut, Kerry O'Donnell, Ludwig Pfenning, Randy C. Ploetz, Robert H. Proctor, Stephen A. Rehner, Vincent A.R.G. Robert, Alejandro P. Rooney, Baharuddin Bin Salleh, Maria Mercedes Scandiani, Jonathan Scauflaire, Dylan P.G. Short, Emma Steenkamp, Haruhisa Suga, Brett A. Summerell, Deanna A. Sutton, Ulf Thrane, Francis Trail, Anne Van Diepeningen, Hans D. VanEtten, Altus Viljoen, Cees Waalwijk, Todd J. Ward, Michael J. Wingfield, Jin Rong Xu, Xiao Bing Yang, Tapani Yli-Mattila, Ning Zhang, 2013, Phytopathology on p. 400-408
Kingdom-wide analysis of fungal small secreted proteins (SSPs) reveals their potential role in host association
Ki Tae Kim, Jongbum Jeon, Jaeyoung Choi, Kyeongchae Cheong, Hyeunjeong Song, Gobong Choi, Seogchan Kang, Yong Hwan Lee, 2016, Frontiers in Plant Science
Fusarium oxysporum volatiles enhance plant growth via affecting auxin transport and signaling
Vasileios Bitas, Nathaniel McCartney, Ningxiao Li, Jill Demers, Jung Eun Kim, Hye Seon Kim, Kathleen M. Brown, Seogchan Kang, 2015, Frontiers in Microbiology
Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic fusarium that includes the fusarium solani species complex
David M. Geiser, Abdullah M.S. Al-Hatmi, Takayuki Aoki, Tsutomu Arie, Virgilio Balmas, Irene Barnes, Gary C. Bergstrom, Madan K. Bhattacharyya, Cheryl L. Blomquist, Robert L. Bowden, Balazs Brankovics, Daren W. Brown, Lester W. Burgess, Kathryn Bushley, Mark Busman, Jose F. Cano-Lira, Joseph D. Carrillo, Hao Xun Chang, Chi Yu Chen, Wanquan Chen, Martin Chilvers, Sofia Chulze, Jeffrey J. Coleman, Christina A. Cuomo, Z. Wilhelm de Beer, G. Sybren de Hoog, Johanna Del Castillo-Munera, Emerson M. Del Ponte, Javier Dieguez-Uribeondo, Antonio Di Pietro, Veronique Edel-Hermann, Wade H. Elmer, Lynn Epstein, Akif Eskalen, Maria Carmela Esposto, Kathryne L. Everts, Sylvia P. Fernandez-Pavıa, Gilvan Ferreira da Silva, Nora A. Foroud, Gerda Fourie, Rasmus J.N. Frandsen, Stanley Freeman, Michael Freitag, Omer Frenkel, Kevin K. Fuller, Tatiana Gagkaeva, Donald M. Gardiner, Anthony E. Glenn, Scott E. Gold, Thomas R. Gordon, Nancy F. Gregory, Marieka Gryzenhout, Josep Guarro, Beth K. Gugino, Santiago Gutierrez, Kim E. Hammond-Kosack, Linda J. Harris, Monika Homa, Cheng Fang Hong, Laszlo Hornok, Jenn Wen Huang, Macit Ilkit, Adriaana Jacobs, Karin Jacobs, Cong Jiang, Marıa del Mar Jimenez-Gasco, Seogchan Kang, Matthew T. Kasson, Kemal Kazan, John C. Kennell, Hye Seon Kim, H. Corby Kistler, Gretchen A. Kuldau, Tomasz Kulik, Oliver Kurzai, Imane Laraba, Matthew H. Laurence, Theresa Lee, Yin Won Lee, Yong Hwan Lee, John F. Leslie, Edward C.Y. Liew, Lily W. Lofton, Antonio F. Logrieco, Manuel S. Lopez-Berges, Alicia G. Luque, Erik Lysøe, Li Jun Ma, Robert E. Marra, Frank N. Martin, Sara R. May, Susan P. McCormick, Chyanna McGee, Jacques F. Meis, Quirico Migheli, N. M.I. Mohamed Nor, Michel Monod, Antonio Moretti, Diane Mostert, Giuseppina Mule, Françoise Munaut, Gary P. Munkvold, Paul Nicholson, Marcio Nucci, Kerry O’Donnell, Matias Pasquali, Ludwig H. Pfenning, Anna Prigitano, Robert H. Proctor, Stephane Ranque, Stephen A. Rehner, Martijn Rep, Gerardo Rodrıguez-Alvarado, Lindy Joy Rose, Mitchell G. Roth, Carmen Ruiz-Roldan, Amgad A. Saleh, Baharuddin Salleh, Hyunkyu Sang, Marıa Mercedes Scandiani, Jonathan Scauflaire, David G. Schmale, Dylan P.G. Short, Adnan Sisic, Jason A. Smith, Christopher W. Smyth, Hokyoung Son, Ellie Spahr, Jason E. Stajich, Emma Steenkamp, Christian Steinberg, Rajagopal Subramaniam, Haruhisa Suga, Brett A. Summerell, Antonella Susca, Cassandra L. Swett, Christopher Toomajian, Terry J. Torres-Cruz, Anna M. Tortorano, Martin Urban, Lisa J. Vaillancourt, Gary E. Vallad, Theo A.J. van der Lee, Dan Vanderpool, Anne D. van Diepeningen, Martha M. Vaughan, Eduard Venter, Marcele Vermeulen, Paul E. Verweij, Altus Viljoen, Cees Waalwijk, Emma C. Wallace, Grit Walther, Jie Wang, Todd J. Ward, Brian L. Wickes, Nathan P. Wiederhold, Michael J. Wingfield, Ana K.M. Wood, Jin Rong Xu, Xiao Bing Yang, Tapani Yli-Mattila, Sung Hwan Yun, Latiffah Zakaria, Hao Zhang, Ning Zhang, Sean X. Zhang, Xue Zhang, 2021, Phytopathology on p. 1064-1079
Volatile compound-mediated recognition and inhibition between trichoderma biocontrol agents and fusarium oxysporum
Ningxiao Li, Alsayed Alfiky, Wenzhao Wang, Md Islam, Khoshnood Nourollahi, Xingzhong Liu, Seogchan Kang, 2018, Frontiers in Microbiology on p. 1-15
Global Expression Profiling of Transcription Factor Genes Provides New Insights into Pathogenicity and Stress Responses in the Rice Blast Fungus
Sook Young Park, Jaeyoung Choi, Se Eun Lim, Gir Won Lee, Jongsun Park, Yang Kim, Sunghyung Kong, Se Ryun Kim, Hee Sool Rho, Junhyun Jeon, Myung Hwan Chi, Soonok Kim, Chang Hyun Khang, Seogchan Kang, Yong Hwan Lee, 2013, PLoS Pathogens
Stop and smell the fungi: Fungal volatile metabolites are overlooked signals involved in fungal interaction with plants
Ningxiao Li, Alsayed Alfiky, Martha M. Vaughan, Seogchan Kang, 2016, Fungal Biology Reviews on p. 134-144