Laura Carrel
Professor of Biochemistry and Molecular Biology
-
Hershey Med Ctr
University Park, - luc3@psu.edu
Research Summary
Genetic, epigenetic, and genomic regulation of expression on the mammalian X chromosome.
Huck Affiliations
Links
Publication Tags
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Genes Drugs Drug Chromatin Predictions Autoimmune Diseases Genome X Chromosome Inactivation Drug Repositioning Transcriptome Genome Wide Association Study Systemic Lupus Erythematosus Epigenomics X Chromosome Cells Genetic Association Studies Chromosomes Meta Analysis Loci Monocytes Biomarkers Gene Expression Inhibitors Inactivation Biological MarkerMost Recent Publications
Integrating single cell expression quantitative trait loci summary statistics to understand complex trait risk genes
Lida Wang, Chachrit Khunsriraksakul, Havell Markus, Dieyi Chen, Fan Zhang, Fang Chen, Xiaowei Zhan, Laura Carrel, Dajiang Liu, Bibo Jiang, 2024, Nature Communications
Dissecting heritability, environmental risk, and air pollution causal effects using > 50 million individuals in MarketScan
Daniel McGuire, Havell Markus, Lina Yang, Jingyu Xu, Austin Montgomery, Arthur Berg, Qunhua Li, Laura Carrel, Dajiang J. Liu, Bibo Jiang, 2024, Nature Communications
The complete sequence and comparative analysis of ape sex chromosomes
Kateryna D. Makova, Brandon D. Pickett, Robert Scott Harris, Gabrielle A. Hartley, Monika Cechova, Karol Pal, Sergey Nurk, Dong Ahn Yoo, Qiuhui Li, Prajna Hebbar, Barbara Claire McGrath, Francesca Antonacci, Margaux Aubel, Arjun Biddanda, Matthew Borchers, Erich Bornberg-Bauer, Gerard G. Bouffard, Shelise Y. Brooks, Lucia Carbone, Laura Carrel, Andrew Carroll, Pi Chuan Chang, Chen Shan Chin, Daniel E. Cook, Sarah J.C. Craig, Luciana de Gennaro, Mark Diekhans, Amalia Dutra, Gage H. Garcia, Patrick G.S. Grady, Richard E. Green, Diana Haddad, Pille Hallast, William T. Harvey, Glenn Hickey, David A. Hillis, Savannah J. Hoyt, Hyeonsoo Jeong, Kaivan Kamali, Sergei L.Kosakovsky Pond, Troy M. LaPolice, Charles Lee, Alexandra P. Lewis, Yong Hwee E. Loh, Patrick Masterson, Kelly M. McGarvey, Rajiv C. McCoy, Paul Medvedev, Karen H. Miga, Katherine M. Munson, Evgenia Pak, Benedict Paten, Brendan J. Pinto, Tamara Potapova, Arang Rhie, Joana L. Rocha, Fedor Ryabov, Oliver A. Ryder, Samuel Sacco, Kishwar Shafin, Valery A. Shepelev, Viviane Slon, Steven J. Solar, Jessica M. Storer, Peter H. Sudmant, Sweetalana, Alex Sweeten, Michael G. Tassia, Françoise Thibaud-Nissen, Mario Ventura, Melissa A. Wilson, Alice C. Young, Huiqing Zeng, Xinru Zhang, Zachary A. Szpiech, Christian D. Huber, Jennifer L. Gerton, Soojin V. Yi, Michael C. Schatz, Ivan A. Alexandrov, Sergey Koren, Rachel J. O’Neill, Evan E. Eichler, Adam M. Phillippy, 2024, Nature on p. 401-411
Integrating summary statistics of expression quantitative trait loci from single cell RNASeq data to understand cell type specific effects for complex traits
Lida Wang, Chakrit Khunsriraksakul, Havell Markus, D Ms Chen, Xingyan Wang, C Fang, Fang Chen, X Zhan, Laura Carrel, Dajiang Liu, L Carrel, DJ Liu, Bibo Jiang, Bibo Jiang, 2024, Nature Communications
Multi-ancestry and multi-trait genome-wide association meta-analyses inform clinical risk prediction for systemic lupus erythematosus
C Khunsriraksakul, Q Li, H Markus, M Patrick, R Sauteraud, D McGuire, Xingyan Wang, C Wang, L Wang, S Chen, G Shenoy, B Li, X Zhong, Nancy J. Olsen, Laura Carrel, L Tsoi, Bibo Jiang, Dajiang J. Liu, 2023, Nature Communications on p. 668
Construction and Application of Polygenic Risk Scores in Autoimmune Diseases
C Khunsriraksakul, H Markus, Nancy J. Olsen, Laura Carrel, Bibo Jiang, Dajiang J. Liu, 2022, Frontiers in Immunology on p. 889296
Integrating 3D genomic and epigenomic data to enhance target gene discovery and drug repurposing in transcriptome-wide association studies
C Khunsriraksakul, D McGuire, R Sauteraud, F Chen, L Yang, L Wang, J Hughey, S Eckert, J Dylan Weissenkampen, G Shenoy, O Marx, Laura Carrel, Bibo Jiang, Dajiang J. Liu, 2022, Nature Communications on p. 3258
Inferring genes that escape X-Chromosome inactivation reveals important contribution of variable escape genes to sex-biased diseases
Renan Sauteraud, Jill M. Stahl, Jesica James, Marisa Englebright, Fang Chen, Xiaowei Zhan, Laura Carrel, Dajiang J. Liu, 2021, Genome Research on p. 1629-1637
Prothrombotic variants as modifiers of clinical phenotype in four related individuals with haemophilia A
Laura Carrel, Sarah Arnold-Croop, Ty Achtermann, Fang Chen, Yuhuan Cheng, Dajiang Liu, M. Elaine Eyster, 2021, Haemophilia on p. e591-e595
Diagnosing Dehydrated Hereditary Stomatocytosis due to a KCNN4 Gardos Channel Mutation: Understanding Challenges through Study of a Multi-Generational Family
S Waldstein, S Arnold-Croop, Laura Carrel, M Eyster, 2021, EJHaem on p. 485-487
Most-Cited Papers
When the lyon(Ized chromosome) roars: Ongoing expression from an inactive X chromosome
Laura Carrel, Carolyn Brown, 2017, Philosophical Transactions of the Royal Society B: Biological Sciences
Inferring genes that escape X-Chromosome inactivation reveals important contribution of variable escape genes to sex-biased diseases
Renan Sauteraud, Jill M. Stahl, Jesica James, Marisa Englebright, Fang Chen, Xiaowei Zhan, Laura Carrel, Dajiang J. Liu, 2021, Genome Research on p. 1629-1637
Integrating 3D genomic and epigenomic data to enhance target gene discovery and drug repurposing in transcriptome-wide association studies
C Khunsriraksakul, D McGuire, R Sauteraud, F Chen, L Yang, L Wang, J Hughey, S Eckert, J Dylan Weissenkampen, G Shenoy, O Marx, Laura Carrel, Bibo Jiang, Dajiang J. Liu, 2022, Nature Communications on p. 3258
Multi-ancestry and multi-trait genome-wide association meta-analyses inform clinical risk prediction for systemic lupus erythematosus
C Khunsriraksakul, Q Li, H Markus, M Patrick, R Sauteraud, D McGuire, Xingyan Wang, C Wang, L Wang, S Chen, G Shenoy, B Li, X Zhong, Nancy J. Olsen, Laura Carrel, L Tsoi, Bibo Jiang, Dajiang J. Liu, 2023, Nature Communications on p. 668
Construction and Application of Polygenic Risk Scores in Autoimmune Diseases
C Khunsriraksakul, H Markus, Nancy J. Olsen, Laura Carrel, Bibo Jiang, Dajiang J. Liu, 2022, Frontiers in Immunology on p. 889296
Computational and statistical analyses of insertional polymorphic endogenous retroviruses in a non-model organism
Le Bao, Daniel Elleder, Raunaq Malhotra, Michael DeGiorgio, Theodora Maravegias, Lindsay Horvath, Laura Carrel, Colin Gillin, Tomáš Hron, Helena Fábryová, David R. Hunter, Mary Poss, 2014, Computation on p. 221-245
Moderate X-chromosome inactivation skewing underlies factor VIII activity in symptomatic carriers from a family with mild haemophilia A
Peter Cygan, Laura Carrel, M. E. Eyster, 2016, Haemophilia on p. e559-e561
The complete sequence and comparative analysis of ape sex chromosomes
Kateryna D. Makova, Brandon D. Pickett, Robert Scott Harris, Gabrielle A. Hartley, Monika Cechova, Karol Pal, Sergey Nurk, Dong Ahn Yoo, Qiuhui Li, Prajna Hebbar, Barbara Claire McGrath, Francesca Antonacci, Margaux Aubel, Arjun Biddanda, Matthew Borchers, Erich Bornberg-Bauer, Gerard G. Bouffard, Shelise Y. Brooks, Lucia Carbone, Laura Carrel, Andrew Carroll, Pi Chuan Chang, Chen Shan Chin, Daniel E. Cook, Sarah J.C. Craig, Luciana de Gennaro, Mark Diekhans, Amalia Dutra, Gage H. Garcia, Patrick G.S. Grady, Richard E. Green, Diana Haddad, Pille Hallast, William T. Harvey, Glenn Hickey, David A. Hillis, Savannah J. Hoyt, Hyeonsoo Jeong, Kaivan Kamali, Sergei L.Kosakovsky Pond, Troy M. LaPolice, Charles Lee, Alexandra P. Lewis, Yong Hwee E. Loh, Patrick Masterson, Kelly M. McGarvey, Rajiv C. McCoy, Paul Medvedev, Karen H. Miga, Katherine M. Munson, Evgenia Pak, Benedict Paten, Brendan J. Pinto, Tamara Potapova, Arang Rhie, Joana L. Rocha, Fedor Ryabov, Oliver A. Ryder, Samuel Sacco, Kishwar Shafin, Valery A. Shepelev, Viviane Slon, Steven J. Solar, Jessica M. Storer, Peter H. Sudmant, Sweetalana, Alex Sweeten, Michael G. Tassia, Françoise Thibaud-Nissen, Mario Ventura, Melissa A. Wilson, Alice C. Young, Huiqing Zeng, Xinru Zhang, Zachary A. Szpiech, Christian D. Huber, Jennifer L. Gerton, Soojin V. Yi, Michael C. Schatz, Ivan A. Alexandrov, Sergey Koren, Rachel J. O’Neill, Evan E. Eichler, Adam M. Phillippy, 2024, Nature on p. 401-411
Investigation of discordant phenotype in mild Hemophilia A using whole exome sequencing
Peter H. Cygan, Sarah E. Arnold-Croop, Elizabeth A. Weidman, Fang Chen, Dajiang J. Liu, M. Elaine Eyster, Laura Carrel, 2020, Thrombosis Research on p. 36-39
Integrating single cell expression quantitative trait loci summary statistics to understand complex trait risk genes
Lida Wang, Chachrit Khunsriraksakul, Havell Markus, Dieyi Chen, Fan Zhang, Fang Chen, Xiaowei Zhan, Laura Carrel, Dajiang Liu, Bibo Jiang, 2024, Nature Communications
News Articles Featuring Laura Carrel
Jun 12, 2023
Penn State announces tenure-line faculty promotions, effective July 1, 2023
The following is a list of academic promotions for tenured and tenure-line faculty members at Penn State, effective July 1, 2023.
Full Article
Jun 28, 2022
New machine learning technique shows how drugs can be repurposed
A new machine learning method to model gene expression levels might improve the identification of genes that cause human diseases, according to a new study by Penn State College of Medicine researchers.
Full Article
Sep 07, 2021
New tool reveals genetic influence of some sex-biased diseases, including lupus
Many human diseases can differ between males and females in their prevalence, manifestation, severity or age of onset. Examples include Lupus, where more than 80% of patients are females; Alzheimer’s disease, where females have higher incidence and tend to suffer quicker cognitive decline; and COVID-19 infections that are frequently more severe in males.
Full Article