Daniel Allen

Assistant Professor of Aquatic Ecology

Daniel Allen

Research Summary

The relationship between community structure and ecosystem processes in rivers and streams, and factors which influence this relationship across local, landscape, and regional spatial scales.

Huck Graduate Students

Huck Affiliations

Links

Most Recent Publications

Reviews and syntheses: Variable inundation across Earth's terrestrial ecosystems

James Stegen, Amy Burgin, Michelle Busch, Joshua Fisher, Joshua Ladau, Jenna Abrahamson, Lauren Kinsman-Costello, L Li, Xingyuan Chen, Thibault Datry, Nate Mcdowell, Corianne Tatariw, Anna Braswell, Jillian Deines, Julia Guimond, Peter Regier, Kenton Rod, Edward Bam, Etienne Fluet-Chouinard, Inke Forbrich, Kristin Jaeger, Teri O'Meara, Tim Scheibe, Erin Seybold, J Sweetman, Jianqiu Zheng, Daniel Allen, Elizabeth Herndon, Beth Middleton, Scott Painter, Kevin Roche, Julianne Scamardo, Ross Vander Vorste, Kristin Boye, Ellen Wohl, Margaret Zimmer, Kelly Hondula, Maggi Laan, Anna Marshall, Kaizad Patel, 2025, Biogeosciences on p. 995-1034

Unravelling large-scale patterns and drivers of biodiversity in dry rivers

Arnaud Foulquier, Thibault Datry, Roland Corti, Daniel von Schiller, Klement Tockner, Rachel Stubbington, Mark O. Gessner, Frédéric Boyer, Marc Ohlmann, Wilfried Thuiller, Delphine Rioux, Christian Miquel, Ricardo Albariño, Daniel C. Allen, Florian Altermatt, Maria Isabel Arce, Shai Arnon, Damien Banas, Andy Banegas-Medina, Erin Beller, Melanie L. Blanchette, Joanna Blessing, Iola Gonçalves Boëchat, Kate Boersma, Michael Bogan, Núria Bonada, Nick Bond, Katherine Brintrup, Andreas Bruder, Ryan Burrows, Tommaso Cancellario, Cristina Canhoto, Stephanie Carlson, Núria Cid, Julien Cornut, Michael Danger, Bianca de Freitas Terra, Anna Maria De Girolamo, Rubén del Campo, Verónica Díaz Villanueva, Fiona Dyer, Arturo Elosegi, Catherine Febria, Ricardo Figueroa Jara, Brian Four, Sarig Gafny, Rosa Gómez, Lluís Gómez-Gener, Simone Guareschi, Björn Gücker, Jason Hwan, J. Iwan Jones, Patrick S. Kubheka, Alex Laini, Simone Daniela Langhans, Bertrand Launay, Guillaume Le Goff, Catherine Leigh, Chelsea Little, Stefan Lorenz, Jonathan Marshall, Eduardo J. Martin Sanz, Angus McIntosh, Clara Mendoza-Lera, Elisabeth I. Meyer, Marko Miliša, Musa C. Mlambo, Manuela Morais, Nabor Moya, Peter Negus, Dev Niyogi, Iluminada Pagán, Athina Papatheodoulou, Giuseppe Pappagallo, Isabel Pardo, Petr Pařil, Steffen U. Pauls, Marek Polášek, Pablo Rodríguez-Lozano, Robert J. Rolls, Maria Mar Sánchez-Montoya, Ana Savić, Oleksandra Shumilova, Kandikere R. Sridhar, Alisha Steward, Amina Taleb, Avi Uzan, Yefrin Valladares, Ross Vander Vorste, Nathan J. Waltham, Dominik H. Zak, Annamaria Zoppini, 2024, Nature Communications

Macroinvertebrate, algal and diatom assemblages respond differently to both drying and wetting transitions in non-perennial streams

Michelle H. Busch, Kate S. Boersma, Stephen C. Cook, C. Nathan Jones, Chad Loflen, Raphael D. Mazor, Rosalina Stancheva, Adam N. Price, Rachel Stubbington, Margaret A. Zimmer, Daniel C. Allen, 2024, Freshwater Biology on p. 1568-1582

Impacts of stream drying depend on stream network size and location of drying

Megan C. Malish, Shang Gao, Daniel C. Allen, Thomas M. Neeson, 2024, Ecological Applications

Biogeochemical and community ecology responses to the wetting of non-perennial streams

Adam Price, Margaret Zimmer, Anna Bergstrom, Amy Burgin, Erin Seybold, Corey Krabbenhoft, Sam Zipper, Michelle Busch, Walter Dodds, Annika Walters, Jane Rogosch, Rachel Stubbington, Richard Walker, James Stegen, Thibault Datry, Mathis Messager, Julian Olden, Sarah Godsey, Margaret Shanafield, David Lytle, Ryan Burrows, Kendra Kaiser, George Allen, Meryl Mims, Jonathan Tonkin, Michael Bogan, John Hammond, Kate Boersma, Allison Myers-Pigg, Amanda DelVecchia, Daniel Allen, Songyan Yu, Adam Ward, 2024, Nature Water on p. 815-826

Human activities shape global patterns of decomposition rates in rivers

S. Tiegs, K. Capps, D. Costello, J. Schmidt, C. Patrick, J. Follstad Shah, C. Leroy, Vicenç Acuña, Ricardo Albariño, Daniel Allen, Cecilia Alonso, Patricio Andino, Clay Arango, Jukka Aroviita, Marcus Barbosa, Leon Barmuta, Colden Baxter, Brent Bellinger, Luz Boyero, Lyubov Bragina, Lee Brown, Andreas Bruder, Denise Bruesewitz, Francis Burdon, Marcos Callisto, Antonio Camacho, Cristina Canhoto, María Castillo, Eric Chauvet, Joanne Clapcott, Fanny Colas, Checo Colón-Gaud, Julien Cornut, Verónica Crespo-Pérez, Wyatt Cross, Joseph Culp, Michael Danger, Olivier Dangles, Elvira de Eyto, Alison Derry, Veronica Díaz Villanueva, Michael Douglas, Arturo Elosegi, Andrea Encalada, Sally Entrekin, Rodrigo Espinosa, Verónica Ferreira, Carmen Ferriol, Kyla Flanagan, Alexander Flecker, Tadeusz Fleituch, André Frainer, Nikolai Friberg, Paul Frost, Erica Garcia, Liliana García-Lago, Pavel García Soto, Mark Gessner, Sudeep Ghate, Darren Giling, 2024, Science on p. 1191-1195

Combined benthic and stream edge sampling better represent macroinvertebrate assemblages than benthic sampling alone along an aridity gradient

Brian A. Gill, Daniel C. Allen, Meryl C. Mims, Thomas M. Neeson, Albert Ruhi, Carla L. Atkinson, Arial J. Shogren, Travis M. Apgar, Zacchaeus G. Compson, Stephen Cook, Daryl R. Trumbo, Michelle H. Busch, Kelsey D. Hollien, Kyle Leathers, Megan C. Malish, Grace L. O'Malley, Samuel Silknetter, Chelsea R. Smith, Howard Dunleavy, Michael T. Bogan, 2024, Limnology and Oceanography: Methods on p. 208-216

Global patterns of allochthony in stream–riparian meta-ecosystems

Daniel C. Allen, James Larson, Christina A. Murphy, Erica A. Garcia, Kurt E. Anderson, Michelle H. Busch, Alba Argerich, Alice M. Belskis, Kierstyn T. Higgins, Brooke E. Penaluna, Veronica Saenz, Jay Jones, Matt R. Whiles, 2024, Ecology Letters

The Role of Fuh's Parameter in Predicting Global Water Budget Deficits and Runoff Ratio Sensitivity

Brian Brown, Caleb Crandall, Daniel Allen, Aimee Fullerton, David Grimsman, Matthew Heaton, Jeremy Jones, Darin Kopp, Lillian McGill, Claire Ruffing, others, 2024, ESS Open Archive

Asynchronous movement patterns between breeding and stopover locations in a long-distance migratory songbird

Theodore J. Zenzal, Andrea Contina, Hannah B.Vander Zanden, Leanne K. Kuwahara, Daniel C. Allen, Kristen M. Covino, 2024, Avian Conservation and Ecology

Most-Cited Papers

Global patterns and drivers of ecosystem functioning in rivers and riparian zones

Scott Tiegs, David Costello, Mark Isken, Guy Woodward, Peter McIntyre, Mark Gessner, Eric Chauvet, Natalie Griffiths, Alex Flecker, Vicenc Acuna, Vicenç Acuña, Ricardo Albariño, Ricardo Albarino, Daniel Allen, Cecilia Alonso, Patricio Andino, Clay Arango, Jukka Aroviita, Marcus V.M. Barbosa, Barbosa, Marcus V. M., Leon Barmuta, Colden Baxter, Bell, Thomas D. C., Thomas D.C. Bell, Brent Bellinger, Luz Boyero, Lee Brown, Andreas Bruder, Denise Bruesewitz, Francis Burdon, Marcos Callisto, Cristina Canhoto, Krista Capps, Maria Castillo, Joanne Clapcott, Fanny Colas, Checo Colón-Gaud, Checo Colon-Gaud, Julien Cornut, Verónica Crespo-Pérez, Veronica Crespo-Perez, Wyatt Cross, Joseph Culp, Michael Danger, Olivier Dangles, Elvira De Eyto, de Eyto, Elvira, Alison Derry, Diaz Villanueva, Veronica, Veronica Díaz Villanueva, Michael Douglas, Arturo Elosegi, Andrea Encalada, Sally Entrekin, Rodrigo Espinosa, Diana Ethaiya, Veronica Ferreira, Carmen Ferriol, Kyla Flanagan, Tadeusz Fleituch, Shah, Jennifer J. Follstad, Jennifer J.Follstad Shah, André Frainer Barbosa, Andre Frainer, Nikolai Friberg, Paul Frost, Erica Garcia, Liliana Lago, Pavel Ernesto García Soto, Garcia Soto, Pavel Ernesto, Sudeep Ghate, Darren Giling, Alan Gilmer, José Francisco Gonçalves, Goncalves, Jose Francisco, Jr., Rosario Gonzales, Graca, Manuel A. S., Manuel A.S. Graça, Mike Grace, Hans-Peter Grossart, François Guérold, Francois Guerold, Vlad Gulis, Luiz Hepp, Scott Higgins, Takuo Hishi, Joseph Huddart, John Hudson, Samantha Imberger, Carlos Iñiguez-Armijos, Carlos Iniguez-Armijos, Tomoya Iwata, David Janetski, Eleanor Jennings, Andrea Kirkwood, Aaron Koning, Sarian Kosten, Kevin Kuehn, Hjalmar Laudon, Peter Leavitt, Aurea L.Lemes Da Silva, Lemes da Silva, Aurea L., Shawn Leroux, Carri Leroy, Peter Lisi, Richard MacKenzie, Amy Marcarelli, Frank Masese, Brendan Mckie, Adriana Oliveira Medeiros, Oliveira Medeiros, Adriana, Kristian Meissner, Marko Miliša, Marko Milisa, Shailendra Mishra, Yo Miyake, Ashley Moerke, Shorok Mombrikotb, Rob Mooney, Tim Moulton, Timo Muotka, Junjiro Negishi, Vinicius Neres-Lima, Mika Nieminen, Jorge Nimptsch, Jakub Ondruch, Riku Paavola, Isabel Pardo, Christopher Patrick, Edwin T.H.M. Peeters, Peeters, Edwin T. H. M., Jesus Pozo, Catherine Pringle, Aaron Prussian, Estefania Quenta, Antonio Quesada, Brian Reid, John Richardson, Anna Rigosi, Jose Rincon, José Rincón, Geta Risnoveanu, Geta Rîşnoveanu, C Robinson, Lorena Rodríguez-Gallego, Lorena Rodriguez-Gallego, Todd Royer, James Rusak, Anna Santamans, Geza Selmeczy, Gelas Simiyu, Agnija Skuja, Jerzy Smykla, Kandikere Sridhar, Ryan Sponseller, Aaron Stoler, Christopher Swan, David Szlag, Franco Teixeira-De Mello, Teixeira-de Mello, Franco, Jonathan Tonkin, Sari Uusheimo, Allison Veach, Sirje Vilbaste, Lena B.M. Vought, Vought, Lena B. M., Chiao-Ping Wang, Jackson Webster, Paul Wilson, Stefan Woelfl, Marguerite Xenopoulos, Adam Yates, Chihiro Yoshimura, Catherine Yule, Yixin Zhang, Jacob Zwart, 2019, Science advances on p. eaav0486

A global analysis of terrestrial plant litter dynamics in non-perennial waterways

T. Datry, A. Foulquier, R. Corti, D. Von Schiller, von Schiller, D., K. Tockner, C. Mendoza-Lera, J. Clement, J. C. Clément, M. Gessner, M. Moleón, M. Moleon, R. Stubbington, B. Gücker, B. Gucker, R. Albarino, R. Albarinõ, Daniel Allen, F. Altermatt, Arce, M., I, M. I. Arce, S. Arnon, D. Banas, A. Banegas-Medina, E. Beller, M. Blanchette, J. Blanco-Libreros, J. Blessing, I. G. Boëchat, I. Boechat, K. Boersma, M. Bogan, N. Bonada, N. Bond, Brintrup Barria, K. C., K. C. Brintrup Barriá, A. Bruder, R. Burrows, T. Cancellario, C. Canhoto, S. Carlson, S. Cauvy-Fraunie, S. Cauvy-Fraunié, N. Cid, M. Danger, Bianca De Freitas Terra, Terra, Bianca de Freitas, A. M. De Girolamo, De Girolamo, A. M., Evans De La Barra, de La Barra, Evans, del Campo, R., R. Del Campo, V. Diaz-Villanueva, F. Dyer, A. Elosegi, E. Faye, C. Febria, B. Four, S. Gafny, S. Ghate, R. Gomez, R. Gómez, L. Gómez-Gener, L. Gomez-Gener, Graca, M. A. S., M. A.S. Gracą, S. Guareschi, F. Hoppeler, J. Hwan, J. I. Jones, Jones, J., I, S. Kubheka, A. Laini, S. Langhans, C. Leigh, C. Little, S. Lorenz, J. Marshall, E. Martín, E Martin, A. McIntosh, E. I. Meyer, Meyer, E., I, M. Miliša, M. Milisa, M. Mlambo, M. Morais, N. Moya, P. Negus, D. Niyogi, A. Papatheodoulou, I Pardo, P. Paril, P. Pařil, S. Pauls, V. Pešić, V Pesic, M. Polasek, M. Polášek, C Robinson, P. Rodriguez-Lozano, P. Rodríguez-Lozano, R. Rolls, M. Sanchez-Montoya, M. M. Sánchez-Montoya, A. Savić, A. Savic, O. Shumilova, K. Sridhar, A. Steward, R. Storey, A. Taleb, A. Uzan, Ross Vander Vorste, Vander Vorste, Ross, N. Waltham, C. Woelfle-Erskine, D. Zak, C. Zarfl, A. Zoppini, 2018, Nature Geoscience on p. 497-503

Assessing placement bias of the global river gauge network

Corey Krabbenhoft, George Allen, Peirong Lin, Sarah Godsey, Daniel Allen, Ryan Burrows, Amanda DelVecchia, Ken Fritz, Margaret Shanafield, Amy Burgin, Margaret Zimmer, Thibault Datry, Walter Dodds, C Jones, Meryl Mims, Catherin Franklin, J Hammond, Sam Zipper, Adam Ward, Katie Costigan, Hylke Beck, Julian Olden, 2022, Nature Sustainability on p. 586-592

Pervasive changes in stream intermittency across the United States

Samuel C. Zipper, John C. Hammond, Margaret Shanafield, Margaret Zimmer, Thibault Datry, C. Nathan Jones, Kendra E. Kaiser, Sarah E. Godsey, Ryan M. Burrows, Joanna R. Blaszczak, Michelle H. Busch, Adam N. Price, Kate S. Boersma, Adam S. Ward, Katie Costigan, George H. Allen, Corey A. Krabbenhoft, Walter K. Dodds, Meryl C. Mims, Julian D. Olden, Stephanie K. Kampf, Amy J. Burgin, Daniel C. Allen, 2021, Environmental Research Letters

Zero or not? Causes and consequences of zero-flow stream gage readings

Margaret A. Zimmer, Kendra E. Kaiser, Joanna R. Blaszczak, Samuel C. Zipper, John C. Hammond, Ken M. Fritz, Katie H. Costigan, Jacob Hosen, Sarah E. Godsey, George H. Allen, Stephanie Kampf, Ryan M. Burrows, Corey A. Krabbenhoft, Walter Dodds, Rebecca Hale, Julian D. Olden, Margaret Shanafield, Amanda G. DelVecchia, Adam S. Ward, Meryl C. Mims, Thibault Datry, Michael T. Bogan, Kate S. Boersma, Michelle H. Busch, C. Nathan Jones, Amy J. Burgin, Daniel C. Allen, 2020, Wiley Interdisciplinary Reviews: Water

Spatial Patterns and Drivers of Nonperennial Flow Regimes in the Contiguous United States

John C. Hammond, Margaret Zimmer, Margaret Shanafield, Kendra Kaiser, Sarah E. Godsey, Meryl C. Mims, Samuel C. Zipper, Ryan M. Burrows, Stephanie K. Kampf, Walter Dodds, C. Nathan Jones, Corey A. Krabbenhoft, Kate S. Boersma, Thibault Datry, Julian D. Olden, George H. Allen, Adam N. Price, Katie Costigan, Rebecca Hale, Adam S. Ward, Daniel C. Allen, 2021, Geophysical Research Letters

What's in a name? Patterns, trends, and suggestions for defining non-perennial rivers and streams

Michelle H. Busch, Katie H. Costigan, Ken M. Fritz, Thibault Datry, Corey A. Krabbenhoft, John C. Hammond, Margaret Zimmer, Julian D. Olden, Ryan M. Burrows, Walter K. Dodds, Kate S. Boersma, Margaret Shanafield, Stephanie K. Kampf, Meryl C. Mims, Michael T. Bogan, Adam S. Ward, Mariana Perez Rocha, Sarah Godsey, George H. Allen, Joanna R. Blaszczak, C. Nathan Jones, Daniel C. Allen, 2020, Water (Switzerland)

River ecosystem conceptual models and non-perennial rivers: A critical review

Daniel C. Allen, Thibault Datry, Kate S. Boersma, Michael T. Bogan, Andrew J. Boulton, Daniel Bruno, Michelle H. Busch, Katie H. Costigan, Walter K. Dodds, Ken M. Fritz, Sarah E. Godsey, Jeremy B. Jones, Tatiana Kaletova, Stephanie K. Kampf, Meryl C. Mims, Thomas M. Neeson, Julian D. Olden, Amandine V. Pastor, N. Le Roy Poff, Benjamin L. Ruddell, Albert Ruhi, Gabriel Singer, Paolo Vezza, Adam S. Ward, Margaret Zimmer, 2020, Wiley Interdisciplinary Reviews: Water

Waterbird community composition, abundance, and diversity along an urban gradient

Riley Andrade, Heather L. Bateman, Janet Franklin, Daniel Allen, 2018, Landscape Planning on p. 103-111

Sediment Respiration Pulses in Intermittent Rivers and Ephemeral Streams

D. von Schiller, T. Datry, R. Corti, A. Foulquier, K. Tockner, R. Marcé, G. García-Baquero, I. Odriozola, B. Obrador, A. Elosegi, C. Mendoza-Lera, M. O. Gessner, R. Stubbington, R. Albariño, D. C. Allen, F. Altermatt, M. I. Arce, S. Arnon, D. Banas, A. Banegas-Medina, E. Beller, M. L. Blanchette, J. F. Blanco-Libreros, J. Blessing, I. G. Boëchat, K. S. Boersma, M. T. Bogan, N. Bonada, N. R. Bond, K. Brintrup, A. Bruder, R. M. Burrows, T. Cancellario, S. M. Carlson, S. Cauvy-Fraunié, N. Cid, M. Danger, B. de Freitas Terra, A. Dehedin, A. M. De Girolamo, R. del Campo, V. Díaz-Villanueva, C. P. Duerdoth, F. Dyer, E. Faye, C. Febria, R. Figueroa, B. Four, S. Gafny, R. Gómez, L. Gómez-Gener, M. A.S. Graça, S. Guareschi, B. Gücker, F. Hoppeler, J. L. Hwan, S. Kubheka, A. Laini, S. D. Langhans, C. Leigh, C. J. Little, S. Lorenz, J. Marshall, E. J. Martín, A. McIntosh, E. I. Meyer, M. Miliša, M. C. Mlambo, M. Moleón, M. Morais, P. Negus, D. Niyogi, A. Papatheodoulou, I. Pardo, P. Pařil, V. Pešić, C. Piscart, M. Polášek, P. Rodríguez-Lozano, R. J. Rolls, M. M. Sánchez-Montoya, A. Savić, O. Shumilova, A. Steward, A. Taleb, A. Uzan, R. Vander Vorste, N. Waltham, C. Woelfle-Erskine, D. Zak, C. Zarfl, A. Zoppini, 2019, Global Biogeochemical Cycles on p. 1251-1263