200 People Results for the Tag: Methodology
Reka Albert
Professor of Physics and Biology
Biological physics and network modeling.
Center for Infectious Disease Dynamics
Benjamin Allen
Assistant Research Professor
Computational approaches to protein engineering; Using protein structure to guide bioinformatics for projects including identification of malaria vaccine targets
Michael Axtell
Professor of Biology
Discovery and characterization of plant microRNAs and siRNAs. Functions of microRNAs and siRNAs in the evolution of plant development. Genomics and bioinformatics of microRNAs, siRNAs, and their targets
Sheri Berenbaum
Professor of Psychology and Pediatrics
Development and neuroendocrine basis of human sex-typed cognition and social behavior.
Ottar Bjornstad
Huck Chair of Epidemiology; Distinguished Professor of Entomology and Biology; Adjunct Professor in Statistics
Population ecology and population dynamics with particular emphasis on mathematical and computational aspects
Center for Infectious Disease Dynamics
Surinder Chopra
Professor of Maize Genetics
Regulation of flavonoid biosynthesis during plant development and plant-pathogen interaction. Epigenetic regulation and allele specific patterns.
Jessica Conway
Assistant Professor of Mathematics
Viral infection dynamics and interplay with therapies for elimination or control
Center for Infectious Disease Dynamics
Ali Demirci
Professor-in-Charge of the CSL Behring Fermentation Facility; Professor of Agricultural and Biological Engineering
Claude dePamphilis
Professor of Biology
Genomics, bioinformatics, and molecular evolution. Origin and diversification of flowers and developmental pathways. Comparative genomics of plants, organelles, and plant gene families. Genomics, evolution, and functional biology of parasitic plants.
Matthew Ferrari
Huck Career Development Professor; Associate Professor of Biology
Public Health, Quantitative Epidemiology, Population Ecology, Statistics, Computational and Mathematical Biology
Center for Infectious Disease Dynamics
Rick Gilmore
Professor of Psychology
The cognitive neuroscience of perception, memory, and action in infancy and early childhood.
Bruce Gluckman
Professor of Engineering Science and Mechanics; Professor of Neurosurgery; Professor of Biomedical Engineering; Associate Director, Penn State Center for Neural Engineering
The dynamics of neural systems, how group dynamics form or emerge from the coupled dynamics of individual units, and how to measure and interact with these systems.
John Hayes
Associate Professor of Food Science
Psychophysics of taste and flavor perception; role of genetic variation on food preferences
Heather Hines
Associate Professor of Biology and Entomology
Applies genomic, transcriptomic, phylogenomic, and bioinformatic approaches to study the evolution and genetics of diverse traits in bees and wasps. This includes study of mimetic color diversification, plant gall induction, novel morphologies, speciation, and social evolution.
Kevin Hockett
Huck Early Career Chair; Assistant Professor of Microbial Ecology
Biological Control, Biology and Ecology of Plant-Microbe and Plant-Environment Interactions, Microbial Ecology and Population Biology Faculty
Center for Infectious Disease Dynamics
Nina Jablonski
Evan Pugh University Professor of Anthropology
Evolutionary history of Old World primates, including humans. Evolution of human skin and skin pigmentation, and the relationship between skin pigmentation and vitamin D production.
Dezhe Jin
Associate Professor of Physics
Computational models of neural basis of motor control and learning; theoretical analysis of biological neural networks.
Joyce Jose
Assistant Professor of Biochemistry & Molecular Biology
Virus-host interactions involved in the pathogenesis of alphaviruses and flaviviruses. Analysis of virus induced structures and cytoskeletal modifications in mammalian host and insect vector using high-resolution live cell imaging and electron microscopy. Viral determinants of neurotropism, encephalitis, transmission and persistence in BSL-3 pathogens.
Center for Infectious Disease Dynamics
Qunhua Li
Associate Professor of Statistics
Developing statistical and computational methods for analyzing complex omics data and improving quality and reproducibility of high-throughout data
Anton Nekrutenko
Professor of Biochemistry and Molecular Biology
Evolution of overlapping reading frames in eukaryotic genomes.
George Perry
Chair, Intercollege Graduate Degree Program in Bioinformatics and Genomics; Associate Professor of Anthropology and Biology
Anthropological genomics, paleogenomics, human body size evolution, parasite evolution, and evolutionary medicine.
Center for Infectious Disease Dynamics
Justin Pritchard
Huck Early Career Entrepreneurial Professorship; Assistant Professor of Biomedical Engineering;
Using systems and synthetic biology approaches to understand and control drug resistance.
Andrew Read
Director, Huck Institutes of the Life Sciences; Evan Pugh Professor of Biology and Entomology; Eberly Professor of Biotechnology
The ecology and evolutionary genetics of infectious disease.
Center for Infectious Disease Dynamics
Tim Reluga
Associate Professor of Mathematics and Biology
Dynamics of biological systems
Center for Infectious Disease Dynamics
Tanya Renner
Assistant Professor of Entomology
Evolution of chemical and structural defense. Molecular evolution, evolutionary genomics, and transcriptomics. Origins and evolution of carnivorous plants.
Cooduvalli Shashikant
Former Chair, Intercollege Graduate Degree Program in Bioinformatics and Genomics
Developmental and evolutionary aspects of regulation of patterning genes.
Yinong Yang
Professor, Department of Plant Pathology and Environmental Microbiology
Signal perception and transduction in rice-pathogen interactions. Molecular and genomic strategies for increasing disease resistance and drought tolerance in cereal crops.
Anne Vardo-Zalik
Assistant Professor of Biology
The ecology and population genetics of malaria parasites and their vectors
Center for Infectious Disease Dynamics
David R Hunter
Professor of Statistics, Department Head
I work on statistical models for networks, mixture models, and certain optimization algorithms called MM algorithms. A full list of papers and related work, such as software, may be found at http://sites.stat.psu.edu/~dhunter/.
Center for Infectious Disease Dynamics
Ephraim M. Hanks
Associate Professor of Statistics
Spatio-Temporal Statistics. Bayesian Hierarchical Modeling. Optimal Sampling. Animal Movement. Landscape Genetics.
Center for Infectious Disease Dynamics
James Marden
Associate Director of Operations, Huck Institutes of the Life Sciences; Professor of Biology
How physiological variation within species affects their ecology and evolution. Primarily with insects, but recently also with plants, and a particular interest in allelic variation in the pathogen resistance genes of tropical trees.
Center for Infectious Disease Dynamics
Jasna Kovac
Lester Earl and Veronica Casida Career Development Professor of Food Safety; Assistant Professor of Food Science
Integrating epidemiological, microbiological, molecular and omics methods to better understand microbial pathogenic potential, antimicrobial resistance, and epidemiology of foodborne pathogens.
Center for Infectious Disease Dynamics
Jesse Lasky
Assistant Professor of Biology
Ecological and evolutionary genomics, genetic and ecophysiological basis of adaptation to environmental stress, evolutionary ecology of biological complexity.
Center for Infectious Disease Dynamics
Maciej F Boni
Associate Professor of Biology
Human influenza epidemiology and evolution, evaluating population-level malaria treatment strategies with individual-based microsimulation models, phylogenetic analysis of avian influenza evolution in southern Vietnam, economic epidemiology of avian influenza, evaluating population-level efficacy of a potential dengue vaccine with mathematical models
Center for Infectious Disease Dynamics
Murali Haran
Associate Professor of Statistics
Statistical computing (Markov chain Monte Carlo algorithms); spatial models (Gaussian random field models); methods for complex computer models; interdisciplinary collaborations in environmental sciences, climate science, disease modeling, ecology
Center for Infectious Disease Dynamics
Naomi Altman
Professor Emeritus of Statistics
Bioinformatics, gene expression analysis, functional genomics and gene clustering, experimental design, multiple testing, functional data analysis and nonparametric smoothing.
Nita Bharti
Huck Early Career Professor; Assistant Professor of Biology
The underlying mechanisms for spatial heterogeneities in host disease burden and risk across spatial scales, from regional dynamics to seasonal outbreaks in cities, rural villages, and across borders by assessing regional variations in movement and contact patterns relating to outbreaks and access to health care.
Center for Infectious Disease Dynamics
Patricia A. Dunn
Senior Research Associate, Avian Pathologist and Field Investigator
Center for Infectious Disease Dynamics
Peter Hudson
Former Director, Huck Institutes of the Life Sciences; Willaman Professor of Biology
Population dynamics of infectious diseases in wildlife and the dynamics of parasite community structure.
Center for Infectious Disease Dynamics
Suresh Kuchipudi
Clinical Associate Professor; Section Head Mammalian Virology & Immunology
Diagnostic Virology & Serology -Zoonotic and Emerging Viruses -Negative strand RNA viruses -Avian and Mammalian influenza -Immune responses to viruses -Viral pathogenesis Quantitative-omics approach to virus-host interactions
Center for Infectious Disease Dynamics
Alison Gernand
Ann Atherton Hertzler Early Career Professor in Global Health; Assistant Professor of Nutritional Sciences
Andrew Deans
Professor of Entomology, Director of the Frost Entomological Museum
Carolee Bull
Director of the Microbiome Center; Professor of Plant Pathology; Bacterial Systematics Head, Department of Plant Pathology and Environmental Microbiology
Bacterial systematics, epidemiology, and population biology of bacterial plant pathogens and biological control agents to develop alternatives to synthetic chemicals for plant disease management
Catharine Ross
Professor in Nutritional Science; Dorothy Foehr Huck Chair
Vitamin A metabolism; hepatic retinoid function and gene expression; vitamin A in infection and immunity.
Connie Rogers
Associate Director, Huck Institutes of the Life Sciences; Associate Professor of Nutritional Sciences
Role of changes in energy balance and related nutritional factors on inflammation, immune regulation, and cancer risk using both animal models and human subjects.
Cristina Rosa
Assistant Professor of Plant Pathology & Environmental Microbiology
Plant Virology, interaction of plant viruses with their insects as vectors and with their plant hosts. Virus evolution, exploration of plant viromes, viral co-infections, effect of climate change on viral resistant breaking strains. Use of nanotechnologies for virus detection and virus disease management.
Dajiang Liu
Associate Professor of Public Health Science
Developing novel methods to analyze very large scale datasets in order to identify genes that are responsible for disease, understand the disease mechanism, and gain clinical insights.
Dennis Calvin
Director, Penn State Extension; Associate Dean, College of Agricultural Sciences
Douglas Cavener
Professor and Verne M. Willaman Dean, Eberly College of Science; Chair of the Genetics Program
Regulation of protein synthesis and control of translation initiation of mRNAs in higher eukaryotes and the evolution of tissue specific transcriptional regulation.
Erica Smithwick
Director of the Ecology Institute; Professor of Geography
Uunderstanding how a wide range of disturbances, especially fire, affect ecosystem function at landscape scales.
Etya Amsalem
Assistant Professor of Entomology
The evolutionary development and the mechanistic basis of social behavior in insects using an integrative approach encompassing chemical, genetic and physiological tools
Fang (Rose) Zhu
Assistant Professor of Entomology
Understanding the mechanisms and evolution of insects’ adaptation to chemical stresses in their environment.
Francesca Chiaromonte
Director of the Genome Sciences Institute; Huck Chair in Statistics for the Life Sciences; Professor of Statistics
Developing methods for the analysis of large, high-dimensional and complex data.
Grzegorz (Greg) Krawczyk
Extension Tree Fruit Entomologist, Research Professor
Howard Salis
Associate Professor of Chemical Engineering; Associate Professor of Agricultural and Biological Engineering
Engineering microorganisms for applications in synthetic biology and metabolic engineering.
Joy Pate
Director of the Center for Reproductive Biology and Health; Professor of Reproductive Physiology; C. Lee Rumberger and Family Chair in Agricultural Sciences
Specializing in the area of ovarian function. Primary research interests focus on the interactions between steroidogenic and immune cells, and the role of microRNA in development and maintenance of the corpus luteum.
Kelli Hoover
Professor of Entomology
Invasive species of forest insects; plant-insect-entomopathogen interactions; impacts of plants on pathogenesis; biological control of hemlock woolly adelgid
Kenneth Tamminga
Distinguished Professor of Landscape Architecture
Ecological restoration; ecological design; sustainability; environmental planning; urban green infrastructure; ecology and design pedagogy.
Robert Berghage
Associate Professor of Plant Science
Environmental plant physiology. Controlled and modified environments for plant growth. Eco-roofs, rooftop greening, and other uses of plants in distributed stormwater management systems.
Stephen Schaeffer
Professor of Biology
Population Genetics and Genomics of Chromosomal Rearrangements in Drosophila
Stephen Wilson
Associate Professor of Psychology
Addictive behavior, with a specific focus on cigarette smoking.
Val Beasley
Professor of Veterinary, Wildlife, and Ecological Toxicology
Veterinary, Wildlife, and Ecological Toxicology; One Health; Declining Amphibians; Mycotoxins; Cyanobacterial (blue-green algal) toxins.
Vasant Honavar
Professor and Edward Frymoyer Chair of Information Sciences and Technology
Statistical machine learning algorithms for predictive modeling; modeling and inference of biological networks; characterization and prediction of protein-protein, protein-RNA, and protein-DNA interactions.
Robab Katani
Assistant Research Professor of Global Health
Global health security, infectious diseases, and host-pathogen dynamics, as well as expertise in the enhancement of capabilities in the Low- and Middle-Income Countries, including Tanzania and India.
Center for Infectious Disease Dynamics
Sally Assmann
Waller Professor of Biology
Molecular biology of plant G-proteins and kinases. Phytohormone regulation of signal transduction and RNA processing. Second messenger regulation of ion channels in plant cells.
Daniel Cosgrove
Eberly Chair and Professor of Biology
Mechanism of plant growth. Function and evolution of expansins. Biochemistry and rheology of plant cell walls. Growth responses to light, hormones, and water stress and other stimuli.
Teh-hui Kao
Chair, Intercollege Graduate Degree Program in Plant Biology; Distinguished Professor of Biochemistry and Molecular Biology
Molecular, biochemical, and structural bases of the S-RNase-based self-incompatibility system in flowering plants. F-box protein-mediated ubiquitination and degradation of proteins.
B. Tracy Nixon
Professor of Biochemistry and Molecular Biology
Structural and functional basis of cellulose synthesis. Using Physcomitrella patens and other organisms as model systems, we are learning how plants make cellulose for building new cell wall. The studies use methods of molecular biology and cryoEM to characterize the enzyme as a monomer, and when it assembles into its larger 'Cellulose Synthase Complex '(CSC for short). The aim is to understand cellulose synthesis to explain fundamentals of cell wall biology in plants, and to enable manipulation of its synthesis for applications in fields of bioenergy and materials.
John Golbeck
Professor of Biochemistry and Biophysics
Light reactions in photosynthesis. Structure and function of photosystem I and the heliobacterial reaction center. Regulation and bioassembly of iron-sulfur clusters in cyanobacteria and plants. Plant and bacterial metalloproteins. Generation using Photosystem I, hydrogenase, and molecular wire technology.
Marc Abrams
Professor of Forest Ecology and Physiology
Community, historical and physiological ecology of tree species; global change biology.
Kathleen Brown
Professor of Plant Stress Biology
Regulation of root development. Root responses to edaphic stress. Identification and genetic mapping of traits for adaptation to edaphic stress.
Wayne Curtis
Professor of Chemical Engineering
Regulation and signal transduction in plant secondary metabolism. Phytoremediation of hydrocarbons. Commercial chemical production in plants and plant tissue culture.
David Eissenstat
Professor of Woody Plant Physiology
Plant physiological ecology. Root biology and physiology. Plant carbon and nutrient economies.
Majid Foolad
Professor of Plant Genetics
Genetic characterization of resistance/tolerance to biotic/abiotic stresses, and genes/QTLs contributing to tomato fruit quality. Investigation of genes/QTLs for directed crop improvement and germplasm enhancement. Tomato cultivar development & release.
Mark Guiltinan
J. Franklin Styer Professor of Horticultural Botany; Professor of Plant Molecular Biology; Director, Endowed Program in the Molecular Biology of Cocoa
Plant functional genomics, metabolomics and biotechnology. Identification of key genes for disease resistance and important traits in the tree crop Theoboma cacao, the Chocolate tree.
Mark Shriver
Professor of Biological Anthropology
Human population genomics and complex disease mapping.
David Huff
Professor of Turfgrass Breeding and Genetics
Population genetics. Plant evolution and ecology. Crop improvement. Physiological tolerance to biotic and abiotic stress.
David Geiser
Professor of Plant Pathology
Molecular evolutionary genetics of pathogenic and toxigenic fungi.
Robert Eckhardt
Professor
Genetic and environmental influences on growth and development in human populations.
Charles Andrew Cole
Associate Proessor of Landscape Architecture & Ecology
Ecosystem ecology: wetlands, hydrology, restoration, seed banks, plant communities, historical ecology.
Mary Ann Bruns
Associate Professor of Soil Microbiology and Biogeochemistry
Functional ecology of biogeochemically important microbial populations.
Colin Barnstable
Professor and Chair of Neural Behavioral Sciences
How interacting networks of transcription factors and signal transduction molecules guide the development of precursor/stem cells into mature neurons. Role of these networks in neurodegenerative diseases. Factors that can act as neuroprotective agents.
Siela Maximova
Research Professor of Plant Biotechnology Co-Director, Endowed Program in the Molecular Biology of Cocoa
Molecular basis of plant-pathogen and plant-endophyte interactions. Biotechnology of tree crops. Development of sustainable energy crops.
Margaret Brittingham
Professor of Wildlife Resources
Avian ecology; avian response to oil and gas exploration and development; effects of habitat fragmentation on bird populations; managing wildlife on private land
Duane Diefenbach
Adjunct Asst. Professor of Wildlife Ecology; Leader, PA Coop. Fish and Wildlife Research Unit
Wildlife ecology, estimation of population parameters, and harvest management of game populations.
Joshua Lambert
Associate Professor of Food Science
Dietary polyphenols in prevention of obesity and fatty liver disease; efficacy and mechanisms of action of food-derived phytochemicals in prevention of lung cancer; biotransformation, bioavailability and potential hepatotoxicity of dietary phytochemicals
Carolyn Mahan
Professor of Biology
The study of biodiversity in threatened ecosystems, the effects of human-modified landscapes on wildlife, and behavioral ecology of sciurids. Dr. Mahan teaches introductory biology, environmental studies, field ecology, and evolution.
Gabriele Monshausen
Associate Professor of Biology
Plant cell signaling. Hormonal and mechanical signal transduction in plant growth regulation. Live cell imaging of subcellular microdomains of ionic signaling.
Charles Anderson
Associate Professor of Biology
In vivo imaging of plant cell wall dynamics. Molecular genetic analysis of genes involved in cell growth. Cell wall biosynthesis in dividing cells. Cell wall engineering for sustainable bioenergy production.
David Miller
Associate Professor of Wildlife Population Ecology
Population ecology, quantitative ecology, avian and amphibian ecology, conservation decision analysis, life-history evolution.
Greg Shearer
Associate Professor of Nutritional Sciences
We seek to understand disease-related functional changes in the context of global changes in lipid mediators (bioactive metabolites of dietary fatty acids) and use them to identify markers of disease and better ways to prevent or manage disease
Reuben Kraft
Shuman Assistant Professor of Mechanical Engineering
Computational methods and high performance computing to examine brain neurotrauma biomechanics; human structural connectome analysis using physics-based predictions of biomechanical brain injury.
Edward O’Brien
Associate Professor of Chemistry
Developing and applying Physical Bioinformatic techniques to measure rates of translation transcriptome-wide and their molecular origins as relates to fundamental biology and disease.
Armen Kemanian
Associate Professor of Production Systems and Modeling
Agricultural Systems, Agricultural and Natural Systems Modeling, Soil Carbon and Nitrogen Cycling, Bioenergy Systems, Coupled Hydrologic and Nutrient Modeling, and Plant Competition
Laura Leites
Associate Research Professor of Quantitative Forest Ecology
Adaptation to climate in forest trees, seed movement under a changing climate, forest ecosystem modeling.
Lynn Lin
Assistant Professor of Statistics
Bayesian mixture model development for classification, variable selection, design and model selection, structured and hierarchical non-parametric Bayesian methods, rare event detection, and statistical computation involving simulation and optimization.
Neela Yennawar
Director, X-Ray Crystallography and Automated Biological Calorimetry Core Facilities
Biological calorimetry, protein characterization, molecular modeling, X-ray crystallography, and small-angle X-ray scattering.
Christina M Grozinger
Director of the Center for Pollinator Research; Distinguished Professor and Huck Scholar of Entomology
Genomics of social behavior and health in bees
Center for Infectious Disease Dynamics
Karl Zimmerer
Professor of Geography
Land use and agricultural change/global change, Economic development/globalization/neoliberalism, Nature-society and human-environment theory, Environmental impacts (biodiversity/soils/water/conservation), Food/producer-consumer networks/sustainability.
Barbara Jean Rolls
Professor and Helen A. Guthrie Chair of Nutritional Sciences; Professor of Biobehavioral Health
Yasser El-Manzalawy
Assistant Research Professor of Information Sciences and Technology
Andrew Belmonte
Director of the Center for Mathematical Biology; Professor of Mathematics and Materials Science and Engineering
Game theory and its applications in cancer research.
Julie Cosmidis
Assistant Professor
Microbial biomineralization with a focus on deciphering the molecular mechanisms involved in the formation of minerals by bacteria, the impact of this process on the geochemical cycles of different element (C, P, S, Fe), and the use of microbial biominerals as biosignatures in the rock record and in astrobiological contexts.
Michael Messina
Department Head and Professor of Ecosystem Science and Management
Gary Thompson
Associate Dean for Research and Graduate Education, College of Agricultural Sciences; Director, PA Agricultural Experiment Station
María del Mar Jiménez Gasco
Associate Professor of Plant Pathology and Environmental Mictobiology
Bronwen Powell
Assistant Professor of Geography, African Studies and Anthropology
Erika Ganda
Assistant Professor of Food Animal Microbiomes
Developing practical ways to leverage the microbiome to improve food safety and improve food production animals' production efficiency.
Emily Davenport
Assistant Professor of Biology
Understanding the complex relationship humans have with our microbiomes, using high-throughput sequencing technologies and novel computational and statistical techniques.
David Koslicki
Associate Professor of Computer Science and Engineering
Developing efficient algorithms to extract insight from high-throughput sequencing data.
Sjoerd Willem Duiker
Professor of Soil Management and Applied Soil Physics
Ruairidh Sawers
Assistant Professor of Plant Response to Abiotic Stress
