Paul Babitzke

Co-Director of the Center for RNA Molecular Biology; Professor of Biochemistry and Molecular Biology

Paul Babitzke

Huck Affiliations

Publication Tags

Rna Gene Expression Escherichia Coli Messenger Rna Proteins Base Pairing Guanine Glyoxal Bacillus Subtilis In Vitro Techniques Oryza Cytosine Adenine Binding Sites Rna Stability Uracil Homeostasis Plant Rna Rna Probes Staining And Labeling Ethyldimethylaminopropyl Carbodiimide Bacterial Rna Gels Bacteria Ribosomes

Most Recent Papers

In vivo RNA structural probing of uracil and guanine base-pairing by 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide (EDC)

David Mitchell, Andrew J. Renda, Catherine A. Douds, Paul Lee Babitzke, Sarah Mary Assmann, Philip C. Bevilacqua, 2019, RNA on p. 147-157

In vivo RNA structural probing of uracil and guanine base-pairing by 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide (EDC)

David Mitchell, Andrew J. Renda, Catherine A. Douds, Paul Lee Babitzke, Sarah Mary Assmann, Philip C. Bevilacqua, 2019, RNA on p. 147-157

In vivo RNA structural probing of uracil and guanine base-pairing by 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide (EDC)

David Mitchell, Andrew J. Renda, Catherine A. Douds, Paul Lee Babitzke, Sarah Mary Assmann, Philip C. Bevilacqua, 2019, RNA on p. 147-157

Examination of Csr regulatory circuitry using epistasis analysis with RNA-seq (Epi-seq) confirms that CsrD affects gene expression via CsrA, CsrB and CsrC

Anastasia H. Potts, Yuanyuan Leng, Paul Lee Babitzke, Tony Romeo, 2018, Scientific reports

Global regulation by CsrA and its RNA antagonists

Tony Romeo, Paul Lee Babitzke, 2018, Microbiology Spectrum

Glyoxals as in vivo RNA structural probes of guanine base-pairing

David Mitchell, Laura E. Ritchey, Hongmarn Park, Paul Lee Babitzke, Sarah Mary Assmann, Philip C. Bevilacqua, 2018, RNA on p. 114-124

Glyoxals as in vivo RNA structural probes of guanine base-pairing

David Mitchell, Laura E. Ritchey, Hongmarn Park, Paul Lee Babitzke, Sarah Mary Assmann, Philip C. Bevilacqua, 2018, RNA on p. 114-124

Glyoxals as in vivo RNA structural probes of guanine base-pairing

David Mitchell, Laura E. Ritchey, Hongmarn Park, Paul Lee Babitzke, Sarah Mary Assmann, Philip C. Bevilacqua, 2018, RNA on p. 114-124

Global role of the bacterial post-transcriptional regulator CsrA revealed by integrated transcriptomics

Anastasia H. Potts, Christopher A. Vakulskas, Archana Pannuri, Elena Borisovna Yakhnina, Paul Lee Babitzke, Tony Romeo, 2017, Nature communications

Global role of the bacterial post-transcriptional regulator CsrA revealed by integrated transcriptomics

Anastasia H. Potts, Christopher A. Vakulskas, Archana Pannuri, Elena Borisovna Yakhnina, Paul Lee Babitzke, Tony Romeo, 2017, Nature communications

High-Impact Papers

Regulation of bacterial virulence by Csr (Rsm) systems

Christopher A. Vakulskas, Anastasia H. Potts, Paul Lee Babitzke, Brian M.M. Ahmer, Romeo Tony, 2015, Microbiology and Molecular Biology Reviews on p. 193-224

Circuitry linking the Csr and stringent response global regulatory systems

Adrianne N. Edwards, Laura M. Patterson-Fortin, Christopher A. Vakulskas, Jeffrey W. Mercante, Katarzyna Potrykus, Daniel Vinella, Martha I. Camacho, Joshua A. Fields, Stuart A. Thompson, Dimitris Georgellis, Michael Cashel, Paul Lee Babitzke, Tony Romeo, 2011, Molecular Microbiology on p. 1561-1580

CsrA activates flhDC expression by protecting flhDC mRNA from RNase E-mediated cleavage

Alexander Victor Yakhnin, Carol Sue Baker, Christopher A. Vakulskas, Elena Borisovna Yakhnina, Igor Berezin, Tony Romeo, Paul Lee Babitzke, 2013, Molecular Microbiology on p. 851-866

Integration of a complex regulatory cascade involving the SirA/BarA and Csr global regulatory systems that controls expression of the Salmonella SPI-1 and SPI-2 virulence regulons through HilD

Luary C. Martínez, Elena Borisovna Yakhnina, Martha I. Camacho, Dimitris Georgellis, Paul Lee Babitzke, José L. Puente, Víctor H. Bustamante, 2011, Molecular Microbiology on p. 1637-1656

Molecular Geometry of CsrA (RsmA) Binding to RNA and Its Implications for Regulated Expression

Jeffrey Mercante, Adrianne N. Edwards, Ashok K. Dubey, Paul Lee Babitzke, Tony Romeo, 2009, Journal of Molecular Biology on p. 511-528

A genome-wide analysis of small regulatory RNAs in the human pathogen group a Streptococcus

Nataly Perez, Jeanette Treviño, Zhuyun Liu, Siu Chun Michael Ho, Paul Lee Babitzke, Paul Sumby, 2009, PLoS One

CsrA-FliW interaction governs flagellin homeostasis and a checkpoint on flagellar morphogenesis in Bacillus subtilis

Sampriti Mukherjee, Elena Borisovna Yakhnina, Dave Kysela, Josh Sokoloski, Paul Lee Babitzke, Daniel B. Kearns, 2011, Molecular Microbiology on p. 447-461

Complex regulation of the global regulatory gene csrA

Elena Borisovna Yakhnina, Alexander Victor Yakhnin, Carol Sue Baker, Elena V. Sineva, Igor Berezin, Tony Romeo, Paul Lee Babitzke, 2011, Molecular Microbiology on p. 689-704

CsrA Represses Translation of sdiA, Which Encodes the N-acylhomoserine-L-lactone receptor of Escherichia coli, by Binding exclusively within the coding region of sdiA mRNA

Elena Borisovna Yakhnina, Carol Sue Baker, Igor Berezin, Michael A. Evangelista, Alisa Rassin, Tony Romeo, Paul Lee Babitzke, 2011, Journal of Bacteriology on p. 6162-6170

Dual posttranscriptional regulation via a cofactor-responsive mRNA leader

Laura M. Patterson-Fortin, Christopher A. Vakulskas, Elena Borisovna Yakhnina, Paul Lee Babitzke, Tony Romeo, 2013, Journal of Molecular Biology on p. 3662-3677