Bio
Bioinformatics, large scale biological data analysis, microarrays and sequence analysis. Scientific programming, algorithm development. Database-driven web development.
Most Recent Papers
Genome-wide real-time in vivo transcriptional dynamics during Plasmodium falciparum blood-stage development
Heather J. Painter, Neo Christopher Chung, Aswathy Sebastian, Istvan Albert, John D. Storey, Manuel Llinás, 2018, Nature Communications
Whole-genome sequence analysis reveals unique SNP profiles to distinguish vaccine and wild-type strains of bovine herpesvirus-1 (BoHV-1)
Shubhada K. Chothe, Aswathy Sebastian, Asha Thomas, Ruth H. Nissly, David Wolfgang, Maurice Byukusenge, Sunil Kumar Mor, Sagar M. Goyal, Istvan Albert, Deepanker Tewari, Bhushan M. Jayarao, Suresh V. Kuchipudi, 2018, Virology on p. 27-36
The influence of adolescent nicotine exposure on ethanol intake and brain gene expression
Constanza P. Silva, William J. Horton, Michael J. Caruso, Aswathy Sebastian, Laura C. Klein, Istvan Albert, Helen M. Kamens, 2018, PLoS One
Complete genome sequences of three related avian avulavirus 1 isolates from poultry farmers in Pakistan
M. Zubair Shabbir, Ruth Helmus Nissly, Abdul Ahad, Masood Rabbani, Shubhada K. Chothe, Aswathy Sebastian, Istvan Albert, Bhushan M. Jayarao, Suresh V. Kuchipudi, 2018, Genome Announcements
Whole-genome sequences of 18 bovine alphaherpesvirus 1 field isolates from Pennsylvania and Minnesota
Shubhada K. Chothe, Aswathy Sebastian, Asha Thomas, Ruth Nissly, Maurice Byukusenge, David Wolfgang, Sunil Kumar Mor, Sagar Goyal, Istvan Albert, Bhushan Jayarao, Suresh V. Kuchipudi, 2018, Genome Announcements
Whole-genome sequence of infectious pancreatic necrosis virus isolated from farmed brook trout (Salvelinus fontinalis) in Pennsylvania
Kay Palchak, Shubhada K. Chothe, Aswathy Sebastian, Ruth H. Nissly, Rhiannon Barry, Istvan Albert, Bhushan M. Jayarao, Suresh V. Kuchipudi, 2018, Genome Announcements
Puf3 participates in ribosomal biogenesis in malaria parasites
Xiaoying Liang, Kevin J. Hart, Gang Dong, Faiza A. Siddiqui, Aswathy Sebastian, Xiaolian Li, Istvan Albert, Jun Miao, Scott E. Lindner, Liwang Cui, 2018, Journal of Cell Science
Rapid magnetic isolation of extracellular vesicles via lipid-based nanoprobes
Yuan Wan, Gong Cheng, Xin Liu, Si Jie Hao, Merisa Nisic, Chuan Dong Zhu, Yi Qiu Xia, Wen Qing Li, Zhi Gang Wang, Wen Long Zhang, Shawn J. Rice, Aswathy Sebastian, Istvan Albert, Chandra P. Belani, Si Yang Zheng, 2017, Nature Biomedical Engineering
Tunable and label-free virus enrichment for ultrasensitive virus detection using carbon nanotube arrays
Yin Ting Yeh, Yi Tang, Aswathy Sebastian, Archi Dasgupta, Nestor Perea-Lopez, Istvan Albert, Huaguang Lu, Mauricio Terrones, Si Yang Zheng, 2016, Science Advances
Bioinformatic analysis of microRNA networks following the activation of the constitutive androstane receptor (CAR) in mouse liver
Ruixin Hao, Shengzhong Su, Yinan Wan, Frank Shen, Ben Niu, Denise M. Coslo, Istvan Albert, Xing Han, Curtis J. Omiecinski, 2016, Biochimica et Biophysica Acta - Gene Regulatory Mechanisms on p. 1228-1237
Recent High-Impact Papers
Microbiome remodelling leads to inhibition of intestinal farnesoid X receptor signalling and decreased obesity
Fei Li, Changtao Jiang, Kristopher W. Krausz, Yunfei Li, Istvan Albert, Haiping Hao, Kristin M. Fabre, James B. Mitchell, Andrew D. Patterson, Frank J. Gonzalez, 2013, Nature Communications
Intestinal farnesoid X receptor signaling promotes nonalcoholic fatty liver disease
Changtao Jiang, Cen Xie, Fei Li, Limin Zhang, Robert G. Nichols, Kristopher W. Krausz, Jingwei Cai, Yunpeng Qi, Zhong Ze Fang, Shogo Takahashi, Naoki Tanaka, Dhimant Desai, Shantu G. Amin, Istvan Albert, Andrew D. Patterson, Frank J. Gonzalez, 2015, Journal of Clinical Investigation on p. 386-402
Attractor analysis of asynchronous Boolean models of signal transduction networks
Assieh Saadatpour, István Albert, Réka Albert, 2010, Journal of Theoretical Biology on p. 641-656
Dynamical and structural analysis of a t cell survival network identifies novel candidate therapeutic targets for large granular lymphocyte leukemia
Assieh Saadatpour, Rui Sheng Wang, Aijun Liao, Xin Liu, Thomas P. Loughran, István Albert, Réka Albert, 2011, PLoS Computational Biology
Persistent organic pollutants modify gut microbiota–host metabolic homeostasis in mice through aryl hydrocarbon receptor activation
Limin Zhang, Robert G. Nichols, Jared Correll, Iain A. Murray, Naoki Tanaka, Philip B. Smith, Troy D. Hubbard, Aswathy Sebastian, Istvan Albert, Emmanuel Hatzakis, Frank J. Gonzalez, Gary H. Perdew, Andrew D. Patterson, 2015, Environmental Health Perspectives on p. 679-688
BioStar
Laurence D. Parnell, Pierre Lindenbaum, Khader Shameer, Giovanni Marco Dall'Olio, Daniel C. Swan, Lars Juhl Jensen, Simon J. Cockell, Brent S. Pedersen, Mary E. Mangan, Christopher A. Miller, Istvan Albert, 2011, PLoS Computational Biology
Gene expression during zombie ant biting behavior reflects the complexity underlying fungal parasitic behavioral manipulation
Charissa de Bekker, Robin A. Ohm, Raquel G. Loreto, Aswathy Sebastian, Istvan Albert, Martha Merrow, Andreas Brachmann, David P. Hughes, 2015, BMC genomics
Disease dynamics in a dynamic social network
Claire Christensen, István Albert, Bryan Grenfell, Réka Albert, 2010, Physica A: Statistical Mechanics and its Applications on p. 2663-2674
Testing the kinship theory of intragenomic conflict in honey bees (Apis mellifera)
David A. Galbraith, Sarah D. Kocher, Tom Glenn, Istvan Albert, Greg J. Hunt, Joan E. Strassmann, David C. Queller, Christina M. Grozinger, 2016, Proceedings of the National Academy of Sciences of the United States of America on p. 1020-1025
Materials fabrication from native and recombinant thermoplastic squid proteins
Abdon Pena-Francesch, Sergio Florez, Huihun Jung, Aswathy Sebastian, Istvan Albert, Wayne Curtis, Melik C. Demirel, 2014, Advanced Functional Materials on p. 7401-7409