Costas Maranas

Donald B. Broughton Professor of Chemical Engineering

Costas Maranas

Research Summary

Computational studies of metabolism and gene regulation.

Huck Graduate Students

Huck Affiliations

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Publication Tags

These publication tags are generated from the output of this researcher. Click any tag below to view other Huck researchers working on the same topic.

Escherichia Coli Genome Genes Metabolic Metabolism Phenotype Lipid Metabolism Fluxes Liver Kinetics Genomics Methane Biofuels Enzymes Metabolomics Obesity Pharmacological Metabolism Metabolites Enzyme Kinetics Strain Metabolite Fermentation Gastrointestinal Microbiome Metabolic Engineering Coronavirus

Most Recent Publications

Annesha Sengupta, Anindita Bandyopadhyay, Debolina Sarkar, John Hendry, Max Schubert, Deng Liu, George Church, Costas Maranas, Himadri Pakrasi, mBio

Tianqi Cui, Tom Bertalan, Nelson Ndahiro, Pratik Khare, Michael Betenbaugh, Costas Maranas, Ioannis G. Kevrekidis, 2024, Computers and Chemical Engineering

Proteome efficiency of bioenergetic pathways

Yihui Shen, Hoang Dinh, Edward Cruz, Zihong Chen, Caroline Bartman, Yasuo Yoshikuni, Huimin Zhao, Costas Maranas, Martin Wühr, Joshua Rabinowitz, 2024, Biophysical Journal on p. 248a

Niaz Bahar Chowdhury, Margaret Simons-Senftle, Berengere Decouard, Isabelle Quillere, Martine Rigault, Karuna Anna Sajeevan, Bibek Acharya, Ratul Chowdhury, Bertrand Hirel, Alia Dellagi, Costas Maranas, Rajib Saha, 2023, iScience

Melanie M. Callaghan, Eashant Thusoo, Bishal D. Sharma, Fitsum Getahun, David M. Stevenson, Costas Maranas, Daniel G. Olson, Lee R. Lynd, Daniel Amador-Noguez, 2023, Metabolic Engineering on p. 254-266

Soyeon Choi, Pradeep K. Prabhakar, Ratul Chowdhury, Thomas H. Pendergast, Breeanna R. Urbanowicz, Costas Maranas, Katrien M. Devos, 2023, Journal of Experimental Botany on p. 5532-5546

Vikas Upadhyay, Veda Sheersh Boorla, Costas D. Maranas, 2023, Metabolic Engineering on p. 171-182

Zong-Yen Wu, Wan Sun, Yihui Shen, Jimmy Pratas, P Suthers, Ping-Hung Hsieh, Sudharsan Dwaraknath, Joshua Rabinowitz, Costas Maranas, Zengyi Shao, Yasuo Yoshikuni, 2023, Metabolic Engineering Communications on p. e00220

Hoang V. Dinh, Costas D. Maranas, 2023, Metabolic Engineering on p. 242-255

Shubhada K. Chothe, Padmaja Jakka, Veda Sheersh Boorla, Santhamani Ramasamy, Abhinay Gontu, Ruth H. Nissly, Justin Brown, Gregory Turner, Brent J. Sewall, Dee Ann M. Reeder, Kenneth A. Field, Julie B. Engiles, Saranya Amirthalingam, Abirami Ravichandran, Lindsey LaBella, Meera Surendran Nair, Costas D. Maranas, Suresh V. Kuchipudi, 2023, Viruses

Most-Cited Papers

Laurent Heirendt, Sylvain Arreckx, Thomas Pfau, Sebastián N. Mendoza, Anne Richelle, Almut Heinken, Hulda S. Haraldsdóttir, Jacek Wachowiak, Sarah M. Keating, Vanja Vlasov, Stefania Magnusdóttir, Chiam Yu Ng, German Preciat, Alise Žagare, Siu H.J. Chan, Maike K. Aurich, Catherine M. Clancy, Jennifer Modamio, John T. Sauls, Alberto Noronha, Aarash Bordbar, Benjamin Cousins, Diana C. El Assal, Luis V. Valcarcel, Iñigo Apaolaza, Susan Ghaderi, Masoud Ahookhosh, Marouen Ben Guebila, Andrejs Kostromins, Nicolas Sompairac, Hoai M. Le, Ding Ma, Yuekai Sun, Lin Wang, James T. Yurkovich, Miguel A.P. Oliveira, Phan T. Vuong, Lemmer P. El Assal, Inna Kuperstein, Andrei Zinovyev, H. Scott Hinton, William A. Bryant, Francisco J. Aragón Artacho, Francisco J. Planes, Egils Stalidzans, Alejandro Maass, Santosh Vempala, Michael Hucka, Michael A. Saunders, Costas D. Maranas, Nathan E. Lewis, Thomas Sauter, Bernhard Palsson, Ines Thiele, Ronan M.T. Fleming, 2019, Nature Protocols on p. 639-702

D-OptCom: Dynamic Multi-level and Multi-objective Metabolic Modeling of Microbial Communities

Ali R. Zomorrodi, Mohammad Mazharul Islam, Costas D. Maranas, 2014, ACS Synthetic Biology on p. 247-257

A kinetic model of Escherichia coli core metabolism satisfying multiple sets of mutant flux data

Ali Khodayari, Ali R. Zomorrodi, James C. Liao, Costas D. Maranas, 2014, Metabolic Engineering on p. 50-62

Chiam Yu Ng, Iman Farasat, Costas D. Maranas, Howard M. Salis, 2015, Metabolic Engineering on p. 86-96

Siu Hung Joshua Chan, Margaret N. Simons, Costas D. Maranas, 2017, PLoS Computational Biology

Suresh V. Kuchipudi, Meera Surendran-Nair, R Ruden, M Yon, R Nissly, Kurt J. Vandegrift, R Nelli, Lingling Li, Bhushan Jayarao, Costas D. Maranas, N Levine, K Willgert, Andrew J.K. Conlan, Conlan AJK, R Olsen, J Davis, J Musser, Peter John Hudson, Vivek Kapur, 2022, Proceedings of the National Academy of Sciences of the United States of America

Valerie W.C. Soo, Michael J. McAnulty, Arti Tripathi, Fayin Zhu, Limin Zhang, Emmanuel Hatzakis, Philip B. Smith, Saumya Agrawal, Hadi Nazem-Bokaee, Saratram Gopalakrishnan, Howard M. Salis, James G. Ferry, Costas D. Maranas, Andrew D. Patterson, Thomas K. Wood, 2016, Microbial Cell Factories on p. 11

Limin Zhang, Cen Xie, Robert G. Nichols, Siu H.J. Chan, Changtao Jiang, Ruixin Hao, Philip B. Smith, Jingwei Cai, Margaret N. Simons, Emmanuel Hatzakis, Costas D. Maranas, Frank J. Gonzalez, Andrew D. Patterson, 2016, mSystems on p. e00070-16

Recent advances in the reconstruction of metabolic models and integration of omics data

Rajib Saha, Anupam Chowdhury, Costas D. Maranas, 2014, Current Opinion in Biotechnology on p. 39-45