Cooduvalli Shashikant

Assistant Director for Graduate Training Initiatives, Huck Institutes of the Life Sciences; Chair, Intercollege Graduate Degree Program in Bioinformatics and Genomics; Associate Professor of Molecular and Developmental Biology

Cooduvalli Shashikant

Research Summary

Developmental and evolutionary aspects of regulation of patterning genes.

Huck Institutes Affiliations

Links

Publication Tags

Genes Gene Expression Testis Population Green Fluorescent Proteins Stem Cells Milk Dna Gene Embryonic Structures Binding Sites Reporter Genes Transgenic Mice Mutation Exome Cell Count Organisms Prostate Yeasts Mice Datasets Embryonic Development Cows Chemical Activation Yeast

Most Recent Papers

Novel metrics to measure coverage in whole exome sequencing datasets reveal local and global non-uniformity

Qingyu Wang, Cooduvalli S. Shashikant, Matthew Jensen, Naomi S. Altman, Santhosh Girirajan, 2017, Scientific Reports

Functional and molecular features of the Id4<sup>+</sup> germline stem cell population in mouse testes

Frieda Chan, Melissa J. Oatley, Amy V. Kaucher, Qi En Yang, Charles J. Bieberich, Cooduvalli S. Shashikant, Jon M. Oatley, 2014, Genes and Development on p. 1351-1362

Functional and molecular features of the Id4<sup>+</sup> germline stem cell population in mouse testes

Frieda Chan, Melissa J. Oatley, Amy V. Kaucher, Qi En Yang, Charles J. Bieberich, Cooduvalli S. Shashikant, Jon M. Oatley, 2014, Genes and Development on p. 1351-1362

Presence of viral and bacterial organisms in milk and their association with somatic cell counts

D. A. Herlekar, C. S. Shashikant, A. A. Gurjar, B. M. Jayarao, 2013, Journal of Dairy Science on p. 6336-6346

Cdx1 is essential for the initiation of HoxC8 expression during early embryogenesis

Rachel Ben Haroush Schyr, Yehuda Shabtai, Cooduvalli S. Shashikant, Abraham Fainsod, 2012, FASEB Journal on p. 2674-2684

A FOXA1-binding enhancer regulates Hoxb13 expression in the prostate gland

Ryan P. McMullin, Albert Dobi, Laura N. Mutton, András Orosz, Shilpi Maheshwari, Cooduvalli S. Shashikant, Charles J. Bieberich, 2010, Proceedings of the National Academy of Sciences of the United States of America on p. 98-103

A yeast-based recombinogenic targeting toolset for transgenic analysis of human disease genes

Kevin L. Bentley, Cooduvalli S. Shashikant, Wayne Wang, Nancy H. Ruddle, Frank H. Ruddle, 2010, Annals of the New York Academy of Sciences

Comparison of diverged Hoxc8 early enhancer activities reveals modification of regulatory interactions at conserved cis-acting elements

Cooduvalli S. Shashikant, Stacey A. Bolanowsky, Sanjay Anand, Shawn M. Anderson, 2007, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution on p. 242-249

Evidence for positive and negative regulation of the mouse Cdx2 gene

Wayne C H Wang, Cooduvalli S. Shashikant, 2007, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution on p. 308-321

Transcriptional regulation of human MAP2 gene in melanoma

Kumar M R Bhat, Nityanand Maddodi, Cooduvalli Shashikant, Vijayasaradhi Setaluri, 2006, Nucleic acids research on p. 3819-3832

High-Impact Papers

Functional and molecular features of the Id4<sup>+</sup> germline stem cell population in mouse testes

Frieda Chan, Melissa J. Oatley, Amy V. Kaucher, Qi En Yang, Charles J. Bieberich, Cooduvalli S. Shashikant, Jon M. Oatley, 2014, Genes and Development on p. 1351-1362

A FOXA1-binding enhancer regulates Hoxb13 expression in the prostate gland

Ryan P. McMullin, Albert Dobi, Laura N. Mutton, András Orosz, Shilpi Maheshwari, Cooduvalli S. Shashikant, Charles J. Bieberich, 2010, Proceedings of the National Academy of Sciences of the United States of America on p. 98-103

Cdx1 is essential for the initiation of HoxC8 expression during early embryogenesis

Rachel Ben Haroush Schyr, Yehuda Shabtai, Cooduvalli S. Shashikant, Abraham Fainsod, 2012, FASEB Journal on p. 2674-2684

Presence of viral and bacterial organisms in milk and their association with somatic cell counts

D. A. Herlekar, C. S. Shashikant, A. A. Gurjar, B. M. Jayarao, 2013, Journal of Dairy Science on p. 6336-6346

A yeast-based recombinogenic targeting toolset for transgenic analysis of human disease genes

Kevin L. Bentley, Cooduvalli S. Shashikant, Wayne Wang, Nancy H. Ruddle, Frank H. Ruddle, 2010, Annals of the New York Academy of Sciences

Novel metrics to measure coverage in whole exome sequencing datasets reveal local and global non-uniformity

Qingyu Wang, Cooduvalli S. Shashikant, Matthew Jensen, Naomi S. Altman, Santhosh Girirajan, 2017, Scientific Reports

Functional and molecular features of the Id4<sup>+</sup> germline stem cell population in mouse testes

Frieda Chan, Melissa J. Oatley, Amy V. Kaucher, Qi En Yang, Charles J. Bieberich, Cooduvalli S. Shashikant, Jon M. Oatley, 2014, Genes and Development on p. 1351-1362