Arthur Lesk
Professor of Biology and of Biochemistry & Molecular Biology
-
Wartik
University Park, - aml25@psu.edu
Publication Tags
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Proteins Protein Amino Acid Sequence Sequence Alignment Protein Folding Alignment Amino Acids Protein Structure Glossaries Compression Ephrins Communicable Diseases Eph Family Receptors Databases Time Length Molecular Biology Statistics Framework Set Theory Protein Domains Statistical Inference Superposition Sufficient Statistics Cell CycleMost Recent Publications
Getting ‘ϕψxal’ with proteins: minimum message length inference of joint distributions of backbone and sidechain dihedral angles
Piyumi R. Amarasinghe, Lloyd Allison, Peter J. Stuckey, Maria Garcia de la Banda, Arthur M. Lesk, Arun S. Konagurthu, 2023, Bioinformatics on p. I357-I367
Sequence and structure alignments in post-AlphaFold era
Sandun Rajapaksa, Arun S. Konagurthu, Arthur M. Lesk, 2023, Current Opinion in Structural Biology
Protein structure prediction improves the quality of amino-acid sequence alignment
Arthur M. Lesk, Arun S. Konagurthu, 2022, Proteins: Structure, Function and Genetics on p. 2144-2147
On the reliability and the limits of inference of amino acid sequence alignments
Sandun Rajapaksa, Dinithi Sumanaweera, Arthur M. Lesk, Lloyd Allison, Peter J. Stuckey, Maria Garcia De La Banda, David Abramson, Arun S. Konagurthu, 2022, Bioinformatics on p. I255-I263
Editorial: A Journey Through 50 Years of Structural Bioinformatics in Memoriam of Cyrus Chothia
Alfredo Iacoangeli, Paolo Marcatili, Charlotte Deane, Arthur M. Lesk, Annalisa Pastore, Sarah A. Teichmann, 2022, Frontiers in Molecular Biosciences
On identifying statistical redundancy at the level of amino acid subsequences
Sandun Rajapaksa, Dinithi Sumanaweera, Maria Garcia de La Banda, Peter Stuckey, David Abramson, Lloyd Allison, Arthur Lesk, Arun Konagurthu, 2022, on p. 7
Three-dimensional Structure Databases of Biological Macromolecules
Vaishali P. Waman, Christine Orengo, Gerard J. Kleywegt, Arthur M. Lesk, 2022, on p. 43-91
Paths Through the Yeast Regulatory Network in Different Physiological States
Arthur M. Lesk, Arun S. Konagurthu, 2021, Journal of Molecular Biology
Universal Architectural Concepts Underlying Protein Folding Patterns
Arun S. Konagurthu, Ramanan Subramanian, Lloyd Allison, David Abramson, Peter J. Stuckey, Maria Garcia de la Banda, Arthur M. Lesk, 2021, Frontiers in Molecular Biosciences
Invisible leashes: The tethering VAPs from infectious diseases to neurodegeneration
Erika F. Dudás, Martijn A. Huynen, Arthur M. Lesk, Annalisa Pastore, 2021, Journal of Biological Chemistry
Most-Cited Papers
Molecular mechanism of modulating arrestin conformation by GPCR phosphorylation
Andrija Sente, Raphael Peer, Ashish Srivastava, Mithu Baidya, Arthur M. Lesk, Santhanam Balaji, Arun K. Shukla, M. Madan Babu, Tilman Flock, 2018, Nature Structural Biology on p. 538-545
Statistical inference of protein structural alignments using information and compression
James H. Collier, Lloyd Allison, Arthur M. Lesk, Peter J. Stuckey, Maria Garcia De La Banda, Arun S. Konagurthu, 2017, Bioinformatics on p. 1005-1013
Universal Architectural Concepts Underlying Protein Folding Patterns
Arun S. Konagurthu, Ramanan Subramanian, Lloyd Allison, David Abramson, Peter J. Stuckey, Maria Garcia de la Banda, Arthur M. Lesk, 2021, Frontiers in Molecular Biosciences
Invisible leashes: The tethering VAPs from infectious diseases to neurodegeneration
Erika F. Dudás, Martijn A. Huynen, Arthur M. Lesk, Annalisa Pastore, 2021, Journal of Biological Chemistry
A new statistical framework to assess structural alignment quality using information compression
James H. Collier, Lloyd Allison, Arthur M. Lesk, Maria Garcia De La Banda, Arun S. Konagurthu, 2014, Bioinformatics on p. i512-i518
Sizes of interface residues account for cross-class binding affinity patterns in Eph receptor-ephrin families
Fei Yi Guo, Arthur M. Lesk, 2014, Proteins: Structure, Function and Genetics on p. 349-353
On sufficient statistics of least-squares superposition of vector sets
Arun S. Konagurthu, Parthan Kasarapu, Lloyd Allison, James H. Collier, Arthur M. Lesk, 2014, on p. 144-159
Statistical Compression of Protein Folding Patterns for Inference of Recurrent Substructural Themes
Ramanan Subramanian, Lloyd Allison, Peter J. Stuckey, Maria Garcia De La Banda, David Abramson, Arthur M. Lesk, Arun S. Konagurthu, 2017, on p. 340-349
On the reliability and the limits of inference of amino acid sequence alignments
Sandun Rajapaksa, Dinithi Sumanaweera, Arthur M. Lesk, Lloyd Allison, Peter J. Stuckey, Maria Garcia De La Banda, David Abramson, Arun S. Konagurthu, 2022, Bioinformatics on p. I255-I263
How precise are reported protein coordinate data?
Arun S. Konagurthu, Lloyd Allison, David Abramson, Peter J. Stuckey, Arthur M. Lesk, 2014, Acta Crystallographica Section D: Biological Crystallography on p. 904-906