SOLiD: the next generation DNA sequencer. An all day event to introduce the sequencer and provide examples of applications for it.

SOLiD symposium and genomics core facility open house

January 27, 2009 @ 09:00 am to 04:45 pm

HUB Auditorium (room 117)

Agenda An introduction to the SOLiD - Applied Biosystems' next generation DNA sequencer (HUB auditorium, room 117) 9:00 - 9:20 Overview of the SOLiD in the Core - Dr. Peter Hudson and Dr. Deborah Grove, PSU 9:20 - 10:20 Introduction to the SOLiD technology - Brandon Blakey, AB 10:20 - 10:45 Break 10:45 - 11:15 Galaxy and the SOLiD Data Pipeline - Dr. Anton Nekrutenko, PSU 11:15 - 12:00 Informatics and 3rd party tools - Dr. Michael Hughes, AB Lunch 12:00 - 2:00 Pizza Party and Genomics Core Open House - 4th floor Chandlee Laboratory An overview of SOLiD applications (HUB room 129AB) 2:00 - 2:45 Transcriptome analysis - Brandon Blakey & Dr. Michael Hughes, AB 2:45 - 3:05 Small RNA - Dr. Michael Axtell, PSU 3:05 - 3:15 RNA discussion 3:15 - 3:35 CHiP analysis - Dr. Frank Pugh, PSU 3:35 - 4:15 Targeted Reseqencing and structural rearrangements, SNPs - Brandon Blakey & Dr. Michael Hughes, AB 4:15 - 4:45 Quantification and bar-coding - Dr. Deborah Grove, PSU Attendance Please RSVP to Deborah Grove and specify Symposium and/or Pizza Party. Directions Location of Chandlee laboratory and the Hetzel Union Building (HUB). Taken from the Penn State Campus Map. _ The Genomics Core facility is the combination of the Nucleic Acid and DNA Microarray facilities.

Contact

Deborah Grove
dsg4@psu.edu
814-865-3332