Assessing the impact of dietary interventions on the resistomes of broiler chickens
Ana Fonseca, Sophia Kenney, Stephanie Bierly, John Boney, Erika Ganda,
Oct 2026,
In: Poultry science
Date: Oct 2026
Associations between teat apex, milk microbiota, and udder health in primiparous cows
José A. Ferronatto, Eduardo M. Ramos-Sanchez, Erika K. Ganda, Marcos B. Heinemann, Juliano L. Gonçalves, Marcos V. dos Santos, Julia A. Arantes, Vinicius S. Duarte, Alessandro S. Guimarães, Marcio C. Costa, Marie Joossens, Sarne De Vliegher, Fernando N. Souza, Alice M.M.P. Della Libera,
Aug 2026,
In: Research in veterinary science
Date: Aug 2026
Salmonella Dublin outbreaks in Brazilian cattle
Isabela Pádua Zanon, Victor Santos do Amarante, Sophia Kenney, Tales Fernando da Silva, Yasmin Gonçalves de Castro, João Victor Ferreira Campos, Vasco Azevedo, José Azael Zambrano Uribe, Fabrício Gomes Melo, Flávia Figueira Aburjaile, Bertram Brenig, Henrique Cesar Pereira Figueiredo, Erika Ga...,
Apr 7 2026,
In: Microbiology Spectrum
Date: Apr 7 2026
Draft genomes of Salmonella Dublin from North Dakota State University veterinary diagnostic laboratory
Sophia M. Kenney, Kelli J. Maddock, Erika Ganda,
Apr 2026,
In: Microbiology Resource Announcements
Date: Apr 2026
Mycobiome temporal and functional dynamics in broilers
Ana Fonseca, Sophia Kenney, John Boney, Erika Ganda,
Dec 2025,
In: Poultry science
Date: Dec 2025
Analysis of metagenomic data
Shaopeng Liu, Judith S. Rodriguez, Viorel Munteanu, Cynthia Ronkowski, Nitesh Kumar Sharma, Mohammed Alser, Francesco Andreace, Ran Blekhman, Dagmara Błaszczyk, Rayan Chikhi, Keith A. Crandall, Katja Della Libera, Dallace Francis, Alina Frolova, Abigail Shahar Gancz, Naomi E. Huntley, Pooja Jaiswal...,
Dec 2025,
In: Nature Reviews Methods Primers
Date: Dec 2025
STREAMS guidelines
Julia M. Kelliher, Chloe Mirzayi, Sarah R. Bordenstein, Aaron Oliver, Christina A. Kellogg, Eneida L. Hatcher, Maureen Berg, Petr Baldrian, Mashael Aljumaah, Cassandra Maria Luz Miller, Christopher Mungall, Vlastimil Novak, Alexis Palucki, Ethan Smith, Nazifa Tabassum, Gregory Bonito, J. Rodney Bris...,
Dec 2025,
In: Nature Microbiology
Date: Dec 2025
Host associated probiotics Lactobacillus reuteri and Enterococcus faecium Mitigate multidrug resistant Salmonella enterica in broiler chicks
Abubakar Siddique, Roomana Ali, Saadia Andleeb, Samina Akbar, Zeeshan Hafeez, Muhammad Imran, Emily Van Syoc, Min Yue, Erika Ganda, Abdur Rahman,
Oct 2025,
In: Microbial Pathogenesis
Date: Oct 2025
Genomic evolution of Salmonella Dublin in cattle and humans in the United States
Sophia M. Kenney, Nkuchia M. M'ikanatha, Erika Ganda,
Sep 2025,
In: Applied and environmental microbiology
Date: Sep 2025
Ecologically expanding the One Health framework to unify the microbiome sciences
Nichole Ginnan, Sharifa G. Crandall, Madangchanok Imchen, Francisco Dini-Andreote, Tim I. Miyashiro, Vishal Singh, Erika Ganda, Seth R. Bordenstein,
Jun 2025,
In: mBio
Date: Jun 2025
Prepartum and postpartum rumen fluid microbiomes
Fabio S. Lima, Georgios Oikonomou, Svetlana F. Lima, Marcela L.S. Bicalho, Erika K. Ganda, Jose C. de Oliveira Filho, Gustavo Lorenzo, Plamen Trojacanec, Rodrigo C. Bicalho,
2015,
In: Applied and environmental microbiology
Citations: 182
Oral administration of Faecalibacterium prausnitzii decreased the incidence of severe diarrhea and related mortality rate and increased weight gain in preweaned dairy heifers
Carla Foditsch, Richard Van Vleck Pereira, Erika Korzune Ganda, Marilia Souza Gomez, Eduardo Carvalho Marques, Thiago Santin, Rodrigo Carvalho Bicalho,
Dec 1 2015,
In: PloS one
Citations: 97
The bovine colostrum microbiome and its association with clinical mastitis
Svetlana F. Lima, Andre G.V. Teixeira, Fabio S. Lima, Erika K. Ganda, Catherine H. Higgins, Georgios Oikonomou, Rodrigo C. Bicalho,
Apr 1 2017,
In: Journal of dairy science
Citations: 95
Longitudinal metagenomic profiling of bovine milk to assess the impact of intramammary treatment using a third-generation cephalosporin
Erika K. Ganda, Rafael S. Bisinotto, Svetlana F. Lima, Kristina Kronauer, Dean H. Decter, Georgios Oikonomou, Ynte H. Schukken, Rodrigo C. Bicalho,
Nov 22 2016,
In: Scientific reports
Citations: 95
Subcutaneous immunization with inactivated bacterial components and purified protein of Escherichia coli, Fusobacterium necrophorumand Trueperella pyogenes prevents puerperal metritis in holstein dairy cows
Vinícius Silva Machado, Marcela Luccas De Souza Bicalho, Enoch Brandão De Souza Meira, Rodolfo Rossi, Bruno Leonardo Ribeiro, Svetlana Lima, Thiago Santos, Arieli Kussler, Carla Foditsch, Erika Korzune Ganda, Georgios Oikonomou, Soon Hon Cheong, Robert Owen Gilbert, Rodrigo Carvalho Bicalho,
Mar 17 2014,
In: PloS one
Citations: 70
Analysis of metagenomic data
Shaopeng Liu, Judith S. Rodriguez, Viorel Munteanu, Cynthia Ronkowski, Nitesh Kumar Sharma, Mohammed Alser, Francesco Andreace, Ran Blekhman, Dagmara Błaszczyk, Rayan Chikhi, Keith A. Crandall, Katja Della Libera, Dallace Francis, Alina Frolova, Abigail Shahar Gancz, Naomi E. Huntley, Pooja Jaiswal...,
Dec 2025,
In: Nature Reviews Methods Primers
Citations: 69
Complex Interactions Between Weather, and Microbial and Physicochemical Water Quality Impact the Likelihood of Detecting Foodborne Pathogens in Agricultural Water
Daniel Weller, Natalie Brassill, Channah Rock, Renata Ivanek, Erika Mudrak, Sherry Roof, Erika Ganda, Martin Wiedmann,
Feb 6 2020,
In: Frontiers in Microbiology
Citations: 68
Effect of trace mineral supplementation on selected minerals, energy metabolites, oxidative stress, and immune parameters and its association with uterine diseases in dairy cattle
M. L.S. Bicalho, F. S. Lima, E. K. Ganda, C. Foditsch, E. B.S. Meira, V. S. Machado, A. G.V. Teixeira, G. Oikonomou, R. O. Gilbert, R. C. Bicalho,
Jul 2014,
In: Journal of dairy science
Citations: 68
Evaluation of an on-farm culture system (Accumast) for fast identification of milk pathogens associated with clinical mastitis in dairy cows
Erika Korzune Ganda, Rafael Sisconeto Bisinotto, Dean Harrison Decter, Rodrigo Carvalho Bicalho,
May 2016,
In: PloS one
Citations: 60
Lameness prevalence and risk factors in large dairy farms in upstate New York. Model development for the prediction of claw horn disruption lesions
Carla Foditsch, Georgios Oikonomou, Vinícius Silva Machado, Marcela Luccas Bicalho, Erika Korzune Ganda, Svetlana Ferreira Lima, Rodolfo Rossi, Bruno Leonardo Ribeiro, Arieli Kussler, Rodrigo Carvalho Bicalho,
Jan 1 2016,
In: PloS one
Citations: 57