This page highlights research publications that acknowledge core facilities within the Huck Institutes for the Life Sciences through the use of Research Resource Identifiers (RRIDs). These publications demonstrate the broad impact of Huck’s shared research infrastructure and the important role its core facilities play in supporting innovative life sciences research.
Core Facility Acknowledgements
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RNA polymerase II CTD Ser5 phosphorylation induces competing effects of expansion and compaction.
Cohen MR, Chen W, Dewing SM, Barr WP, Sethi KA, East RB, Onwuzulu OC, Showalter SA, Ball KA
Biophys J. 2026 Aug 18; 125(16): 4204-4218. doi: 10.1016/j.bpj.2026.01.019. 2026 Jan 13. -
Kinetically Divergent Dimanganese-Tyrosyl Radical Cofactor Assembly in Listeria monocytogenes Class I Ribonucleotide Reductase.
Chong PG, Biswas S, Chen C, Cotruvo JA Jr
Biochemistry. 2026 Aug 4; 65(15): 2387-2399. doi: 10.1021/acs.biochem.6c00369. . -
CCR4-NOT is required for suppressing pervasive transcription and retrotransposable elements.
Kulkarni SD, Morrissey A, Sebastian A, Akinniyi OT, Keller CA, Albert I, Mahony S, Reese JC
J Biol Chem. 2026 Aug; 302(8): 113289. doi: 10.1016/j.jbc.2026.113289. 2026 Jun 23. -
Dissecting the Strain and Sex Specific Connectome Signatures of Unanesthetized C57BL/6J and DBA/2J Mice Using Magnetic Resonance Imaging.
Arefin TM, Ünsal HS, Neuberger T, Zhang N, Kamens HM
Genes Brain Behav. 2026 Aug; 25(4): e70060. doi: 10.1111/gbb.70060. . -
Tracing NAD(+) metabolism uncovers adaptive coordination between host and microbiome during colitis.
Alsaadi AI, Wehkamp L, Pothakamury AA, Yahia MS, Prasad P, Gilloteau C, Sadler J, Smith JD, Jenkins BC, Diven GS, Bornhäuser J, Mekdoud T, Tian S, Rosenstiel P, Schreiber S, Bisanz JE, Aden K, McReynolds MR
Cell Rep. 2026 Jul 25; 45(8): 117730. doi: 10.1016/j.celrep.2026.117730. 2026 Jul 25. -
Metabolomics reveals potentiated metabolic perturbations induced by antimalarial drug combinations against Plasmodium falciparum in vitro.
Eya'ane Meva F, Qahash T, Arinaga J, Llinás M
Exp Parasitol. 2026 Jul 17; 288 109171. doi: 10.1016/j.exppara.2026.109171. 2026 Jul 17. -
STING agonist protects against exacerbation of schistosome egg-induced immunopathology.
Liu P, Linnane MS, Jump K, Tian S, Chaudhary S, Mani R, Bisanz JE, Kalantari P
PLoS Pathog. 2026 Jul; 22(7): e1014394. doi: 10.1371/journal.ppat.1014394. 2026 Jul 10. -
PAX3-FOXO1 Contacts BRD4 through Its Acetylated Intrinsically Disordered Region.
Fraser OA, Schleicher MN, Pagano ML, Showalter SA
Biochemistry. 2026 Jul 7; 65(13): 2066-2076. doi: 10.1021/acs.biochem.6c00040. 2026 Jun 12. -
Trans-species microRNAs from the parasitic plant Cuscuta campestris specifically avoid loading onto self Argonautes.
Nien YC, Caron CD, Frutos PJ, Veltri FM, Axtell MJ
Nucleic Acids Res. 2026 Jul 3; 54(13): doi: 10.1093/nar/gkag700. . -
Mechanical compaction alters microstructural and magnetic resonance imaging properties of acute ischemic stroke clots.
Kubicki CJ, Neuberger T, Simon SD, Manning KB
J Cereb Blood Flow Metab. 2026 Jun 25; 271678X261465841. doi: 10.1177/0271678X261465841. 2026 Jun 25. -
Mechanical compaction alters microstructural and magnetic resonance imaging properties of acute ischemic stroke clots.
Kubicki CJ, Neuberger T, Simon SD, Manning KB
J Cereb Blood Flow Metab. 2026 Jun 25; 271678X261465841. doi: 10.1177/0271678X261465841. 2026 Jun 25. -
ATAD3 megadalton complex in Plasmodium falciparum is essential for mitochondrial and cellular viability.
Okoye IC, Lamb IM, Cheung YW, Morrisey JM, Sharma M, Kumar R, Dass S, Shukla A, Rell RS, Mather MW, Llinás M, Chang YW, Vaidya AB
PLoS Pathog. 2026 Jun; 22(6): e1014317. doi: 10.1371/journal.ppat.1014317. 2026 Jun 3. -
Oxidative stress impairs processive motility of the axonal transport motor KIF1A.
Chen AP, Pandey H, Hancock WO
J Biol Chem. 2026 Jun; 302(6): 111471. doi: 10.1016/j.jbc.2026.111471. 2026 Apr 17. -
Brain motion is driven by mechanical coupling with the abdomen.
Garborg CS, Ghitti B, Zhang Q, Ricotta JM, Frank N, Mueller SJ, Greenawalt DI, Turner KL, Kedarasetti RT, Mostafa M, Lee H, Costanzo F, Drew PJ
Nat Neurosci. 2026 Jun; 29(6): 1397-1407. doi: 10.1038/s41593-026-02279-z. 2026 Apr 27. -
The making of a queen: Hormonal regulation of female caste in the social bee Bombus impatiens.
Hasani SAM, Derstine N, Santos PK, Amsalem E
Insect Biochem Mol Biol. 2026 Jun; 191 104558. doi: 10.1016/j.ibmb.2026.104558. 2026 Apr 12. -
Phytochemical Composition of Clonally Propagated Artemisia annua L. in Different Geographical Locations and Its Commercial Supplement Quality.
Towler MJ, Kellogg JJ, Weathers PJ
Molecules. 2026 May 28; 31(11): doi: 10.3390/molecules31111854. 2026 May 28. -
WebCalEM: a browser-based tool for routine and accurate pixel size calibration in cryo-EM.
Dang L, Wang Z, Cho SHJ, Li S, Chakraborty G, Fahim NF, Jiang W
bioRxiv. 2026 May 26; pii: 2026.05.26.726020. doi: 10.64898/2026.05.26.726020. 2026 May 26. -
Glucuronidation metabolomic fingerprinting to map host-microbe metabolism.
Boyle NR, Sekela JJ, Wang M, Mannochio-Russo H, Pyo JJ, Kim MS, Tian S, Koo I, Friedman ES, Tanes C, Anitha M, Tian Y, Morgan EW, Murray IA, Zackular JP, Bittinger K, Lewis JD, Perdew GH, Wu GD, Zemel BS, Dorrestein PC, Bisanz JE, Redinbo MR, Patterson AD
Nat Commun. 2026 May 20; 17(1): doi: 10.1038/s41467-026-73398-1. 2026 May 20. -
Increasing the Compositional Heterogeneity of Single-Chain Amphiphile Membranes Supported by Coacervate Cores Alters Stability and Properties of the Hybrid Protocells.
Joshi MP, Lee J, Chan M, Keating CD
Langmuir. 2026 May 19; 42(19): 13582-13595. doi: 10.1021/acs.langmuir.6c00637. 2026 May 1. -
Increasing the Compositional Heterogeneity of Single-Chain Amphiphile Membranes Supported by Coacervate Cores Alters Stability and Properties of the Hybrid Protocells.
Joshi MP, Lee J, Chan M, Keating CD
Langmuir. 2026 May 19; 42(19): 13582-13595. doi: 10.1021/acs.langmuir.6c00637. 2026 May 1. -
Degradation factor 1, Def1, regulates mRNA translation and decay through Ccr4-Not-dependent ubiquitylation of the ribosome.
Akinniyi OT, Sebastian A, Kulkarni S, Albert I, Reese JC
RNA. 2026 May 18; 32(6): 930-944. doi: 10.1261/rna.080884.125. 2026 May 18. -
Degradation factor 1, Def1, regulates mRNA translation and decay through Ccr4-Not-dependent ubiquitylation of the ribosome.
Akinniyi OT, Sebastian A, Kulkarni S, Albert I, Reese JC
RNA. 2026 May 18; 32(6): 930-944. doi: 10.1261/rna.080884.125. 2026 May 18. -
Integrative host transcriptomic and mucosal microbiome profiling reveals region-specific host-microbiome associations across the human intestine.
Ryu EP, Keller CA, Nichols RG, Tran HN, Brocious PR, Harris LR, Koltun WA, Yochum GS, Davenport ER
bioRxiv. 2026 May 14; pii: 2026.05.13.725025. doi: 10.64898/2026.05.13.725025. 2026 May 14. -
A metabolic constraint in de novo NAD+ synthesis drives mucosal inflammation in IBD.
Wehkamp L, Harris DMM, Kim NM, Alsaadi AI, Wu Q, Oumari M, Taubenheim J, Volk V, Credidio G, Koncina E, Mukherjee PK, Tran F, Mekdoud T, Yu M, Sievers LK, Pavlidis P, Powell N, Wang S, Fung I, Waetzig GH, Rousseaux C, Desreumaux P, Rieder F, Letellier E, Waschina S, Meyer TF, Adolph T, D'Haens G, Kaleta C, Feuerhake F, Verstockt B, McReynolds MR, Rosenstiel P, Schreiber S, Aden K
J Crohns Colitis. 2026 May 8; 20(5): doi: 10.1093/ecco-jcc/jjag043. . -
TACO1 regulates mitochondrial adaptation in hypertension-induced cardiac remodeling and heart failure.
Vetha BSS, McMillan R, Marchant J, Khan MM, Gamble-George J, Afolabi J, Garza-Lopez E, Marshall AG, Perez CPH, Garbrandt D, Mobley B, Schafer J, Kushner M, Kovtun O, Murray DD, Zeczycki T, Kirabo A, Colas A, Wanjalla C, Dai DF, McReynolds M, Aileru A, Hinton A Jr
Res Sq. 2026 May 5; pii: rs.3.rs-9589283. doi: 10.21203/rs.3.rs-9589283/v1. 2026 May 5. -
Hi-C calibration by chemically induced chromosomal interactions.
Li Y, Fischer CWA, Zou F, Du M, Bai L
EMBO Rep. 2026 May; 27(10): 2549-2558. doi: 10.1038/s44319-026-00772-x. 2026 Apr 14. -
Cellular Snowballing: Cell Adhesion and Migration Drive the Self-Assembly of Cell-Microgel Biohybrid Spheroids.
Ataie Z, Kheirabadi S, Li C, Risbud A, Sebastian A, Albert I, Zhang S, Sheikhi A
Adv Sci (Weinh). 2026 May; 13(30): e11302. doi: 10.1002/advs.202511302. 2026 Mar 17. -
Hi-C calibration by chemically induced chromosomal interactions.
Li Y, Fischer CWA, Zou F, Du M, Bai L
EMBO Rep. 2026 May; 27(10): 2549-2558. doi: 10.1038/s44319-026-00772-x. 2026 Apr 14. -
The MICOS Complex Regulates Mitochondrial Structure and Oxidative Stress During Age-Dependent Structural Deficits in the Kidney.
Katti P, Prasad P, Masenga SK, Venkhatesh P, Vue Z, Marshall AG, Rodriguez B, Le H, Garza-Lopez E, Murphy A, Jenkins B, Kadam A, Shao J, Crabtree A, Martin P, Evans C, Phillips MA, Hubert D, Wandira N, Ochayi OM, Tomar D, Williams CR, Gaddy J, Tomeau B, Bell L, Gillyard T, Hamilton M, Sharma V, Khan MM, Zaganjor E, Ajijola OA, Scudese E, Miller Fleming TW, Kinder A, Dash C, Quintana AM, Mobley BC, Berry JD, Jadiya P, Dai DF, Kirabo A, Kovtun O, Schafer JC, Schaffer S, Pereira RO, Murray DD, Gamble-George J, McReynolds MR, Hinton A Jr
Aging Cell. 2026 May; 25(5): e70534. doi: 10.1111/acel.70534. . -
Enabling Fluoroalkyl-Sulfonylalkylation and Fluoroalkyl-Halogenation of Alkenes and Alkynes via Photoredox Catalysis.
Hewa Inaththappulige SIN, Acharya A, Agampodi NDDZ, Singh H, Giri R
J Am Chem Soc. 2026 Apr 29; 148(16): 16882-16893. doi: 10.1021/jacs.6c00567. 2026 Apr 17. -
Membranes arrest the coarsening of mitochondrial condensates in human cells.
Aththawala Gedara SVBD, Penna ST, Feric M
Commun Biol. 2026 Apr 23; 9(1): doi: 10.1038/s42003-026-10085-3. 2026 Apr 23. -
Systemic rhythmicity of host and bacterial bile acid amidates in the mouse.
Reilly ER, Charron-Lamoureux V, Mannochio-Russo H, Morgan EW, Boyle NR, Koo I, Coudriet E, Hao F, Mohanty I, Perdew GH, Dorrestein PC, Patterson AD
Cell Syst. 2026 Apr 15; 17(4): 101541. doi: 10.1016/j.cels.2026.101541. 2026 Mar 26. -
Effect of Stereochemistry on the Antiplasmodial Activity and Metabolomic Profile of Novel Tadalafil Analogues.
Elhalawaty EA, Alseedy HA, Woodland JG, Wicht KJ, Swart T, Rangel GW, Hoppe HC, Chibale K, Llinás M, Abadi AH, Ahmed NS
ACS Med Chem Lett. 2026 May 14; 17(5): 1067-1077. doi: 10.1021/acsmedchemlett.6c00009. 2026 Apr 14. -
Draft genomes of Salmonella Dublin from North Dakota State University veterinary diagnostic laboratory.
Kenney SM, Maddock KJ, Ganda E
Microbiol Resour Announc. 2026 Apr 9; 15(4): e0063625. doi: 10.1128/mra.00636-25. 2026 Mar 4. -
Double Mutations in Plasmodium falciparum Kelch13 drive resistance to next-generation artemisinin derivatives in malaria parasites.
Bower-Lepts C, Ward KE, Wittlin S, Stokes BH, Yeo T, Qahash T, Small-Saunders JL, Park H, Uhlemann AC, Llinás M, Fidock DA, Mok S
bioRxiv. 2026 Apr 3; pii: 2026.04.02.716214. doi: 10.64898/2026.04.02.716214. 2026 Apr 3. -
Catalytic Wiring of Enzymatic Cascades Using ROS-Flux-Regulated Biodegradable Borophene.
Saha P, Krishnakumar S, Yardim A, Skrodzki D, Griffiths A, Aditya T, Pan D
Small. 2026 Apr; 22(22): e12858. doi: 10.1002/smll.202512858. 2026 Feb 17. -
Collateral hypersensitivity between ZY19489 and piperaquine neutralizes PfCRT-mediated drug efflux and Plasmodium falciparum resistance.
Okombo J, Ndiaye T, Qahash T, Moura IMR, Gil-Iturbe E, Hagenah LM, Bridgford JL, Bonatto V, Ward KE, Yeo T, Narwal SK, Orta LV, Anderson I, Dhingra SK, Pasaje CFA, Park H, Kim J, Guido RVC, Jiménez-Diaz MB, Angulo-Barturen I, Niles JC, Mancia F, Uhlemann AC, Mok S, Quick M, Winzeler EA, Leroy D, Llinás M, Thathy V, Fidock DA
Nat Commun. 2026 Apr 1; 17(1): doi: 10.1038/s41467-026-70914-1. 2026 Apr 1. -
FLEXTAG: a small and self-renewable protein labeling system for anti-fading multi-color super-resolution imaging.
Zhang H, Yao Y, Wang X, Zheng Y, Zhang S, Tao Y, Yang H, Wang Y, Liu M, Feric M, Zhou R
Nat Commun. 2026 Mar 9; 17(1): doi: 10.1038/s41467-026-69658-9. 2026 Mar 9. -
FLEXTAG: a small and self-renewable protein labeling system for anti-fading multi-color super-resolution imaging.
Zhang H, Yao Y, Wang X, Zheng Y, Zhang S, Tao Y, Yang H, Wang Y, Liu M, Feric M, Zhou R
Nat Commun. 2026 Mar 9; 17(1): doi: 10.1038/s41467-026-69658-9. 2026 Mar 9. -
Organization of core mitochondrial replication components into multiphasic condensates.
Yao Y, Tangade AS, Livingston Q, Mondal A, Parikh N, Mittal J, Feric M
bioRxiv. 2026 Mar 5; pii: 2026.03.03.709306. doi: 10.64898/2026.03.03.709306. 2026 Mar 5. -
The MICOS Complex Regulates Mitochondrial Structure and Oxidative Stress During Age-Dependent Structural Deficits in the Kidney.
Katti P, Prasad P, Masenga SK, Venkhatesh P, Vue Z, Marshall AG, Rodriguez B, Le H, Garza-Lopez E, Murphy A, Jenkins B, Kadam A, Shao J, Crabtree A, Martin P, Evans C, Phillips MA, Hubert D, Wandira N, Ochayi OM, Tomar D, Williams CR, Gaddy J, Tomeau B, Bell L, Gillyard T, Hamilton M, Sharma V, Khan MM, Zaganjor E, Ajijola OA, Scudese E, Miller Fleming TW, Kinder A, Dash C, Quintana AM, Mobley BC, Berry JD, Jadiya P, Dai DF, Kirabo A, Kovtun O, Schafer JC, Schaffer S, Pereira RO, McReynolds MR, Hinton A Jr
bioRxiv. 2026 Mar 5; pii: 2024.06.09.598108. doi: 10.1101/2024.06.09.598108. 2026 Mar 5. -
Cytokine expression patterns predict suppression of vulnerable neural circuits in a mouse model of Alzheimer's disease.
Chan DCY, Kim C, Kang RY, Kuhn MK, Cramer S, Ünsal H, Beidler LM, Turner KL, Neuberger T, Zhang N, Proctor EA
bioRxiv. 2026 Mar 2; pii: 2024.03.17.585383. doi: 10.1101/2024.03.17.585383. 2026 Mar 2. -
Interkingdom glycine conjugates of indole-3-carboxylates are Ah receptor ligands.
Morgan EW, Annalora AJ, Coslo DM, Gowda K, Desai D, Dong F, Davis EW, Murray IA, Hao F, Koo I, Petersen KS, Kris-Etherton PM, Wolfe T, Erickson R, Walk ST, Bisanz JE, Amin SG, Marcus CB, Patterson AD, Perdew GH
bioRxiv. 2026 Feb 18; pii: 2026.02.13.705761. doi: 10.64898/2026.02.13.705761. 2026 Feb 18. -
Positive relationship between substrate-induced respiration rate and translationally active bacterial counts in soil.
Camillone NR, Bruns MAV, Román R, Wasner D, Couradeau E
mSystems. 2026 Feb 17; 11(2): e0100925. doi: 10.1128/msystems.01009-25. 2026 Jan 16. -
Nutrient State, Aging, and Diet Modulate SAM50-Dependent Mitochondrial Remodeling and Systemic Metabolic Signatures.
Hinton AO Jr, Masenga SK, Baskerville V, Petrovic M, Rodriguez B, Hubert DL, Miller-Fleming TW, Koo YD, Katti P, Venkhatesh P, Kirabo A, Lopez EG, Crabtree A, Marshall A, Blake C, Dash C, Prasad P, Murphy A, Afolabi J, Phillips MA, Evans C, Scudese E, Schafer JC, Berry J, Mobley BC, Dai DF, Mobley H, Winn NC, Khan MM, Pulatani D, Sorrentino J, Gamble-George J, McReynolds M, Wanjalla C
Res Sq. 2026 Feb 16; pii: rs.3.rs-8704245. doi: 10.21203/rs.3.rs-8704245/v1. 2026 Feb 16. -
Cryogenic transmission electron microscopy reveals assembly and nanostructure of PEDOT:PSS.
Ghasemi M, Kirkley LY, Nazari F, Aldahdooh MKR, Del Mundo JT, Gamdha D, Lan YC, Lai PH, Cho SH, Ganapathysubramanian B, Gomez EW, Gomez ED
Nat Commun. 2026 Feb 10; 17(1): doi: 10.1038/s41467-026-68890-7. 2026 Feb 10. -
Coordination of cell organelles to promote metabolon formation.
Sha Z, Pedley AM, Iles TD, Zhang S, Staub JR, Zhou R, Benkovic SJ
Proc Natl Acad Sci U S A. 2026 Feb 3; 123(5): e2532504123. doi: 10.1073/pnas.2532504123. 2026 Jan 26. -
Coordination of cell organelles to promote metabolon formation.
Sha Z, Pedley AM, Iles TD, Zhang S, Staub JR, Zhou R, Benkovic SJ
Proc Natl Acad Sci U S A. 2026 Feb 3; 123(5): e2532504123. doi: 10.1073/pnas.2532504123. 2026 Jan 26. -
Gene expression analysis and proximity labeling reveal post-transcriptional functions of the yeast RNA polymerase II regulator Def1.
Akinniyi OT, Kulkarni S, Hribal MM, Keller CA, Giardine BM, Reese JC
J Biol Chem. 2026 Feb; 302(2): 111003. doi: 10.1016/j.jbc.2025.111003. 2025 Dec 5. -
Reduced Susceptibility to Phytophthora in Non-Transgenic Cacao Progeny Through CRISPR-Cas9 Mediated TcNPR3 Mutagenesis.
Guiltinan MJ, Landherr L, Maximova SN, DelVecchio D, Sebastian A, Albert I
Plant Biotechnol J. 2026 Feb; 24(2): 442-454. doi: 10.1111/pbi.70365. 2025 Sep 9. -
Gene expression analysis and proximity labeling reveal post-transcriptional functions of the yeast RNA polymerase II regulator Def1.
Akinniyi OT, Kulkarni S, Hribal MM, Keller CA, Giardine BM, Reese JC
J Biol Chem. 2026 Feb; 302(2): 111003. doi: 10.1016/j.jbc.2025.111003. 2025 Dec 5. -
Proteomic insights into Pholiota nameko mycelial response to wood-based substrates.
Kothattil S, Pecchia JA, O'Connor E
Fungal Biol. 2026 Feb; 130(1): 101714. doi: 10.1016/j.funbio.2025.101714. 2025 Dec 19. -
Human CCR4-NOT suppresses pervasive transcription and retrotransposable elements.
Kulkarni S, Morrissey A, Sebastian A, Akinniyi OT, Keller CA, Albert I, Mahony S, Reese JC
bioRxiv. 2026 Jan 17; pii: 2026.01.16.699749. doi: 10.64898/2026.01.16.699749. 2026 Jan 17. -
Mutations in legume genes that influence symbiosis create a complex selective landscape for rhizobial symbionts.
Guha S, Bledsoe RB, Sutherland J, Epstein B, Fry GM, Venugopal V, Sankari S, Gil-Polo A, Levin G, Geddes BA, Young ND, Tiffin P, Burghardt LT
ISME J. 2026 Jan 14; 20(1): doi: 10.1093/ismejo/wrag005. . -
Circadian tryptophan metabolism contributes to systemic aryl hydrocarbon receptor activity.
Morgan EW, Murray IA, Coslo DM, Patterson AD, Perdew GH
iScience. 2026 Feb 20; 29(2): 114680. doi: 10.1016/j.isci.2026.114680. 2026 Jan 12. -
Natural triterpenic phenolic esters target PfA-M17 in Plasmodium falciparum.
Mamede L, Rangel GW, Schmitt M, Albrecht S, Spichty M, Bero J, Beaufay C, Florent I, Llinás M, Frédérich M, Quetin-Leclercq J
Malar J. 2026 Jan 2; 25(1): 74. doi: 10.1186/s12936-025-05762-3. 2026 Jan 2. -
Identifying bacterial heme sensor protein interacting partners under varying oxygen tensions using proximity labeling.
Fekete FJ, Weinert EE
J Inorg Biochem. 2026 Jan; 274 113067. doi: 10.1016/j.jinorgbio.2025.113067. 2025 Sep 9. -
Bioprinted Ventilated 3D Alveoliform Epithelial Sacculoids.
Ozbolat I, Kim MH, Moses J, Chroneos Z, Umstead T, Horvath M, Chan C, Oh J
Res Sq. 2025 Dec 30; pii: rs.3.rs-8177180. doi: 10.21203/rs.3.rs-8177180/v1. 2025 Dec 30. -
The role of MICOS in modulating mitochondrial dynamics and structural changes in vulnerable regions of Alzheimer's Disease.
Shao B, Kula B, Le H, Venkhatesh P, Katti P, Marshall AG, Chittaranjan S, Thapilyal S, Namdar HK, Nivedya C, Roszczyk A, Mobley H, Killion M, St John E, Martin P, Rodrigiuez B, Hamilton M, Bell L, Wyckoff SM, Moran LA, Philips M, Hubert D, Tomeau B, Afolabi JM, Kirabo A, Blanco I, Reasonover S, Drake LE, Lippmann ES, Evans C, Santisteban MM, Cheairs TG, Mesenga S, Wanjalla C, Gaddy J, McMillan R, Hernandez Perez CP, Paing HH, Schafer JC, Mobley B, Berry J, Crabtree A, Kovtun O, Goodwin S, Garza Lopez E, Dash C, Dai DF, Miller-Fleming TW, Hinton A Jr, Smith NA
bioRxiv. 2025 Dec 16; pii: 2025.12.13.693635. doi: 10.64898/2025.12.13.693635. 2025 Dec 16. -
Degradation factor 1, Def1, regulates mRNA translation and decay through Ccr4-Not-dependent ubiquitylation of the ribosome.
Akinniyi OT, Sebastian A, Kulkarni S, Albert I, Reese JC
bioRxiv. 2025 Dec 12; pii: 2025.12.10.693450. doi: 10.64898/2025.12.10.693450. 2025 Dec 12. -
Degradation factor 1, Def1, regulates mRNA translation and decay through Ccr4-Not-dependent ubiquitylation of the ribosome.
Akinniyi OT, Sebastian A, Kulkarni S, Albert I, Reese JC
bioRxiv. 2025 Dec 12; pii: 2025.12.10.693450. doi: 10.64898/2025.12.10.693450. 2025 Dec 12. -
A Novel Class of Orally Bioavailable Phenylglycine-Benzoxaborole Conjugates with Antimalarial Activity and Potentially Novel Mechanism of Action.
Morake M, Taylor D, Coertzen D, Njoroge M, Krugmann L, Leshabane M, da Rocha S, Qahash T, Girling G, Coyle R, Lee MCS, Wittlin S, Llinás M, Birkholtz LM, Basarab GS, Chibale K
ACS Med Chem Lett. 2026 Jan 8; 17(1): 22-31. doi: 10.1021/acsmedchemlett.5c00549. 2025 Dec 11. -
A synthetic gut microbiota provides an understanding of the maintenance and functional impact of phage.
Koo H, Heber K, Tian S, Connolly ST, Hao F, Zhao J, Swencki-Underwood B, Patterson AD, Townsend GE, Bisanz JE
mBio. 2025 Dec 10; 16(12): e0234125. doi: 10.1128/mbio.02341-25. 2025 Nov 12. -
Tracing NAD(+) metabolism uncovers adaptive coordination between host and microbiome during colitis.
Alsaadi AI, Welz L, Pothakamury AA, Gilloteau C, Prasad P, Yahia MS, Sadler J, Smith JD, Jenkins BC, Diven GS, Bornhäuser J, Mekdoud T, Tian S, Rosenstiel P, Schreiber S, Bisanz JE, Aden K, McReynolds MR
Res Sq. 2025 Dec 4; pii: rs.3.rs-8195970. doi: 10.21203/rs.3.rs-8195970/v1. 2025 Dec 4. -
Auxin-induced depletion of human CCR4-NOT subunits reveals opposing functions of CNOT1 and CNOT4 in mRNA metabolism.
Kulkarni S, Smith C, Akinniyi OT, Giardine BM, Keller CA, Arnaoutov A, Reese JC
J Biol Chem. 2025 Dec; 301(12): 110862. doi: 10.1016/j.jbc.2025.110862. 2025 Oct 27. -
Auxin-induced depletion of human CCR4-NOT subunits reveals opposing functions of CNOT1 and CNOT4 in mRNA metabolism.
Kulkarni S, Smith C, Akinniyi OT, Giardine BM, Keller CA, Arnaoutov A, Reese JC
J Biol Chem. 2025 Dec; 301(12): 110862. doi: 10.1016/j.jbc.2025.110862. 2025 Oct 27. -
Auxin-induced depletion of human CCR4-NOT subunits reveals opposing functions of CNOT1 and CNOT4 in mRNA metabolism.
Kulkarni S, Smith C, Akinniyi OT, Giardine BM, Keller CA, Arnaoutov A, Reese JC
J Biol Chem. 2025 Dec; 301(12): 110862. doi: 10.1016/j.jbc.2025.110862. 2025 Oct 27. -
NAD(+) depletion drives age-related monocyte hyperinflammation after stroke and is reversed by nicotinamide riboside.
Cabrera M, Eastman B, Ennerfelt H, Alsaadi AI, Alexandrova L, Ay YA, Huang J, Wang Q, Blacher E, McReynolds MR, Andreasson KI, Iweka CA
J Neuroinflammation. 2025 Nov 27; 23(1): 7. doi: 10.1186/s12974-025-03638-6. 2025 Nov 27. -
Hydrophobicity analysis of Chinese Hamster Ovary host cell proteins using analytical hydrophobic interaction chromatography and LC-MS.
Chu LK, Laremore T, Borujeni EE, Xu X, Zydney AL
J Chromatogr A. 2025 Nov 22; 1763 466440. doi: 10.1016/j.chroma.2025.466440. 2025 Oct 4. -
Hydrophobicity analysis of Chinese Hamster Ovary host cell proteins using analytical hydrophobic interaction chromatography and LC-MS.
Chu LK, Laremore T, Borujeni EE, Xu X, Zydney AL
J Chromatogr A. 2025 Nov 22; 1763 466440. doi: 10.1016/j.chroma.2025.466440. 2025 Oct 4. -
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Development, characterization, and curve fitting of rate-dependent models of calcified cerebral embolus analogs for acute ischemic stroke.
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Characterization of the In Situ Stress State of Blood Clots in Ischemic Stroke: The Effect of Initial Conditions and Arterial Interaction.
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Pasteurized Milk Serves as a Passive Surveillance Tool for Highly Pathogenic Avian Influenza Virus in Dairy Cattle.
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The activity of soil microbial taxa in the rhizosphere predicts the success of root colonization.
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Intraoperative Bioprinting for Craniomaxillofacial Bone Reconstruction in Rats and Sheep.
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The ATM Kinase Inhibitor AZD0156 Is a Potent Inhibitor of Plasmodium Phosphatidylinositol 4-Kinase (PI4Kβ) and Is an Attractive Candidate for Medicinal Chemistry Optimization Against Malaria.
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Interferon-γ/Janus Kinase 1/STAT1 Signaling Represses Forkhead Box A1 and Drives a Basal Transcriptional State in Muscle-Invasive Bladder Cancer.
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Genome Instability Precedes Viral Integration in Human Papillomavirus-Transformed Tonsillar Keratinocytes.
Chan K, Tseng C, Milarachi E, Goldrich D, Schneper L, Sheldon K, Aliaga C, Alam S, Chatterjee S, El-Bayoumy K, Meyers C, Goldenberg D, Broach JR
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Human genetics identify convergent signals in mitochondrial LACTB-mediated lipid metabolism in cardiovascular-kidney-metabolic syndrome.
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Direct testing of natural twister ribozymes from over a thousand organisms reveals a broad tolerance for structural imperfections.
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MULTIPLE, REDUNDANT CARBOXYLIC ACID TRANSPORTERS SUPPORT MITOCHONDRIAL METABOLISM IN PLASMODIUM FALCIPARUM.
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MICOS Complex Loss Governs Age-Associated Murine Mitochondrial Architecture and Metabolism in the Liver, While Sam50 Dictates Diet Changes.
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The cacao gene atlas: a transcriptome developmental atlas reveals highly tissue-specific and dynamically-regulated gene networks in Theobroma cacao L.
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Activation of Peroxisome Proliferator-Activated Receptor-β/δ (PPARβ/δ) in Keratinocytes by Endogenous Fatty Acids.
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Biomolecules. 2024 May 21; 14(6): doi: 10.3390/biom14060606. 2024 May 21. -
A Piecewise Design Approach to Engineering a Miniature ACE2 Mimic to Bind SARS-CoV-2.
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ACS Appl Bio Mater. 2024 May 20; 7(5): 3238-3246. doi: 10.1021/acsabm.4c00222. 2024 May 3. -
Evaluation of DNA yield from various tissue and sampling sources for use in single nucleotide polymorphism panels.
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Global Release of Translational Repression Across Plasmodium's Host-to-Vector Transmission Event.
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bioRxiv. 2024 Mar 16; pii: 2024.02.01.577866. doi: 10.1101/2024.02.01.577866. 2024 Mar 16. -
Global Release of Translational Repression Across Plasmodium's Host-to-Vector Transmission Event.
Rios KT, McGee JP, Sebastian A, Moritz RL, Feric M, Absalon S, Swearingen KE, Lindner SE
bioRxiv. 2024 Mar 16; pii: 2024.02.01.577866. doi: 10.1101/2024.02.01.577866. 2024 Mar 16. -
Prophage proteins alter long noncoding RNA and DNA of developing sperm to induce a paternal-effect lethality.
Kaur R, McGarry A, Shropshire JD, Leigh BA, Bordenstein SR
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Intranasal SARS-CoV-2 RBD decorated nanoparticle vaccine enhances viral clearance in the Syrian hamster model.
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Structure and function of the Si3 insertion integrated into the trigger loop/helix of cyanobacterial RNA polymerase.
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Proc Natl Acad Sci U S A. 2024 Feb 20; 121(8): e2311480121. doi: 10.1073/pnas.2311480121. 2024 Feb 14.