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May 2026,
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Mar 5 2026,
In: Molecular cell
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Feb 20 2026,
In: iScience
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Lactobacillus Salivarius-Derived Indole-3-Acetic Acid Promotes AHR-PARP1 Axis-Mediated DNA Repair to Mitigate Intestinal Aging
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Microbiota modulation by a human Paneth cell α-defensin fragment protects against DSS-induced colitis
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Jan 16 2026,
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Maternal emulsifier consumption alters the offspring early-life microbiota and goblet cell function leading to long-lasting diseases susceptibility
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Bile acids and the gut microbiota
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Gut microbiota–bile acid–interleukin-22 axis orchestrates polycystic ovary syndrome
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Microbiome remodelling leads to inhibition of intestinal farnesoid X receptor signalling and decreased obesity
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Jan 2 2015,
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Intermittent Fasting Promotes White Adipose Browning and Decreases Obesity by Shaping the Gut Microbiota
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Intestine-selective farnesoid X receptor inhibition improves obesity-related metabolic dysfunction
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Ketogenic Diets Alter the Gut Microbiome Resulting in Decreased Intestinal Th17 Cells
Qi Yan Ang, Margaret Alexander, John C. Newman, Yuan Tian, Jingwei Cai, Vaibhav Upadhyay, Jessie A. Turnbaugh, Eric Verdin, Kevin D. Hall, Rudolph L. Leibel, Eric Ravussin, Michael Rosenbaum, Andrew D. Patterson, Peter J. Turnbaugh,
2020,
In: Cell
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Intestine farnesoid X receptor agonist and the gut microbiota activate G-protein bile acid receptor-1 signaling to improve metabolism
Preeti Pathak, Cen Xie, Robert G. Nichols, Jessica M. Ferrell, Shannon Boehme, Kristopher W. Krausz, Andrew D. Patterson, Frank J. Gonzalez, John Y.L. Chiang,
Oct 2018,
In: Hepatology
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