EGGS
T. Quinn Smith, Amatur Rahman, Zachary A. Szpiech,
2026,
In: Bioinformatics Advances
Date: 2026
Genomic signatures of adaptation in native lizards exposed to human-introduced fire ants
Braulio A. Assis, Alexis P. Sullivan, Stephanie Marciniak, Christina M. Bergey, Vanessa Garcia, Zachary A. Szpiech, Tracy Langkilde, George H. Perry,
Dec 2025,
In: Nature communications
Date: Dec 2025
Fast and Memory-Efficient Dynamic Programming Approach for Large-Scale EHH-Based Selection Scans
Amatur Rahman, T. Quinn Smith, Zachary A. Szpiech,
Nov 1 2025,
In: Molecular biology and evolution
Date: Nov 1 2025
Nested Admixture during and after the Trans-Atlantic Slave Trade on the Island of Sao Tomé
Marta Ciccarella, Romain Laurent, Zachary A. Szpiech, Etienne Patin, Françoise Dessarps-Freichey, José Utgé, Laure Lémée, Armando Semo, Jorge Rocha, Paul Verdu,
Jul 1 2025,
In: Molecular biology and evolution
Date: Jul 1 2025
Differentiating mechanism from outcome for ancestry-assortative mating in admixed human populations
Dashiell J. Massey, Zachary A. Szpiech, Amy Goldberg,
Apr 1 2025,
In: Genetics
Date: Apr 1 2025
Complete sequencing of ape genomes
Dong Ahn Yoo, Arang Rhie, Prajna Hebbar, Francesca Antonacci, Glennis A. Logsdon, Steven J. Solar, Dmitry Antipov, Brandon D. Pickett, Yana Safonova, Francesco Montinaro, Yanting Luo, Joanna Malukiewicz, Jessica M. Storer, Jiadong Lin, Abigail N. Sequeira, Riley J. Mangan, Glenn Hickey, Graciela Mon...,
2025,
In: Nature
Date: 2025
Selective Sweeps
Z. A. Szpiech, R. D. Hernandez,
Jan 1 2025,
In: Encyclopedia of Evolutionary Biology
Date: Jan 1 2025
Recently Delisted Songbird Harbors Extensive Genomic Evidence of Inbreeding, Potentially Complicating Future Recovery
Anna María Calderón, Andrew W. Wood, Zachary A. Szpiech, David P.L. Toews,
Dec 2024,
In: Evolutionary Applications
Date: Dec 2024
Genomic Consequences of Isolation and Inbreeding in an Island Dingo Population
Ana V. Leon-Apodaca, Manoharan Kumar, Andres Del Castillo, Gabriel C. Conroy, Robert W. Lamont, Steven Ogbourne, Kylie M. Cairns, Liz Borburgh, Linda Behrendorff, Sankar Subramanian, Zachary A. Szpiech,
Jul 1 2024,
In: Genome biology and evolution
Date: Jul 1 2024
The complete sequence and comparative analysis of ape sex chromosomes
Kateryna D. Makova, Brandon D. Pickett, Robert S. Harris, Gabrielle A. Hartley, Monika Cechova, Karol Pal, Sergey Nurk, Dong Ahn Yoo, Qiuhui Li, Prajna Hebbar, Barbara C. McGrath, Francesca Antonacci, Margaux Aubel, Arjun Biddanda, Matthew Borchers, Erich Bornberg-Bauer, Gerard G. Bouffard, Shelise ...,
Jun 13 2024,
In: Nature
Date: Jun 13 2024
Sequencing of 53,831 diverse genomes from the NHLBI TOPMed Program
Daniel Taliun, Daniel N. Harris, Michael D. Kessler, Jedidiah Carlson, Zachary A. Szpiech, Raul Torres, Sarah A.Gagliano Taliun, André Corvelo, Stephanie M. Gogarten, Hyun Min Kang, Achilleas N. Pitsillides, Jonathon LeFaive, Seung been Lee, Xiaowen Tian, Brian L. Browning, Sayantan Das, Anne Katri...,
Feb 11 2021,
In: Nature
Citations: 1,488
Genotype, haplotype and copy-number variation in worldwide human populations
Mattias Jakobsson, Sonja W. Scholz, Paul Scheet, J. Raphael Gibbs, Jenna M. VanLiere, Hon Chung Fung, Zachary A. Szpiech, James H. Degnan, Kai Wang, Rita Guerreiro, Jose M. Bras, Jennifer C. Schymick, Dena G. Hernandez, Bryan J. Traynor, Javier Simon-Sanchez, Mar Matarin, Angela Britton, Joyce Van D...,
Feb 21 2008,
In: Nature
Citations: 699
Selscan
Zachary A. Szpiech, Ryan D. Hernandez,
Oct 1 2014,
In: Molecular biology and evolution
Citations: 637
ADZE
Zachary A. Szpiech, Mattias Jakobsson, Noah A. Rosenberg,
Nov 2008,
In: Bioinformatics
Citations: 607
Genome-wide association studies in diverse populations
Noah A. Rosenberg, Lucy Huang, Ethan M. Jewett, Zachary A. Szpiech, Ivana Jankovic, Michael Boehnke,
May 2010,
In: Nature Reviews Genetics
Citations: 485
Genetic Ancestry and Natural Selection Drive Population Differences in Immune Responses to Pathogens
Yohann Nédélec, Joaquín Sanz, Golshid Baharian, Zachary A. Szpiech, Alain Pacis, Anne Dumaine, Jean Christophe Grenier, Andrew Freiman, Aaron J. Sams, Steven Hebert, Ariane Pagé Sabourin, Francesca Luca, Ran Blekhman, Ryan D. Hernandez, Roger Pique-Regi, Jenny Tung, Vania Yotova, Luis B. Barreir...,
Oct 20 2016,
In: Cell
Citations: 381
Long runs of homozygosity are enriched for deleterious variation
Zachary A. Szpiech, Jishu Xu, Trevor J. Pemberton, Weiping Peng, Sebastian Zöllner, Noah A. Rosenberg, Jun Z. Li,
Jul 11 2013,
In: American Journal of Human Genetics
Citations: 242
Comparing spatial maps of human population-genetic variation using procrustes analysis
Chaolong Wang, Zachary A. Szpiech, James H. Degnan, Mattias Jakobsson, Trevor J. Pemberton, John A. Hardy, Andrew B. Singleton, Noah A. Rosenberg,
2010,
In: Statistical Applications in Genetics and Molecular Biology
Citations: 107
Whole-Genome sequencing of pharmacogenetic drug response in racially diverse children with asthma
Angel C.Y. Mak, Marquitta J. White, Walter L. Eckalbar, Zachary A. Szpiech, Sam S. Oh, Maria Pino-Yanes, Donglei Hu, Paǵe Goddard, Scott Huntsman, Joshua Galanter, Ann Chen Wu, Blanca E. Himes, Soren Germer, Julia M. Vogel, Karen L. Bunting, Celeste Eng, Sandra Salazar, Kevin L. Keys, Jennifer Libe...,
Jun 15 2018,
In: American Journal of Respiratory and Critical Care Medicine
Citations: 94
Complete sequencing of ape genomes
Dong Ahn Yoo, Arang Rhie, Prajna Hebbar, Francesca Antonacci, Glennis A. Logsdon, Steven J. Solar, Dmitry Antipov, Brandon D. Pickett, Yana Safonova, Francesco Montinaro, Yanting Luo, Joanna Malukiewicz, Jessica M. Storer, Jiadong Lin, Abigail N. Sequeira, Riley J. Mangan, Glenn Hickey, Graciela Mon...,
2025,
In: Nature
Citations: 91
