Glucuronidation metabolomic fingerprinting to map host-microbe metabolism
Nina R. Boyle, Josh J. Sekela, Mingxun Wang, Helena Mannochio-Russo, Jeong Joo Pyo, Min Soo Kim, Shuchang Tian, Imhoi Koo, Elliot S. Friedman, Ceylan Tanes, Mallappa Anitha, Yuan Tian, Ethan W. Morgan, Iain A. Murray, Joseph P. Zackular, Kyle Bittinger, James D. Lewis, Gary H. Perdew, Gary D. Wu, Ba...,
Dec 2026,
In: Nature communications
Date: Dec 2026
Differential hepatic activation of mouse and human peroxisome proliferator-activated receptor-α by perfluorohexane sulfonate
Yahya Khan, Annalee M. Schmidt, Kyle J. Oldro, Xiaoyang Zhu, Angelina R. Kramer, Sarah R. Hamilton, Katherine O. Bleil, Ryan M. Krisko, Jeremiah D. Zitzow, Yuan Tian, Shu Ching Chang, Vonn Walter, Samuel M. Cohen, Frank J. Gonzalez, Andrew D. Patterson, Jeffrey M. Peters,
May 1 2025,
In: Toxicological Sciences
Date: May 1 2025
A diet-dependent host metabolite shapes the gut microbiota to protect from autoimmunity
Margaret Alexander, Vaibhav Upadhyay, Rachel Rock, Lorenzo Ramirez, Kai Trepka, Patrycja Puchalska, Diego Orellana, Qi Yan Ang, Caroline Whitty, Jessie A. Turnbaugh, Yuan Tian, Darren Dumlao, Renuka Nayak, Andrew Patterson, John C. Newman, Peter A. Crawford, Peter J. Turnbaugh,
Nov 26 2024,
In: Cell Reports
Date: Nov 26 2024
Sphingosine Kinase 2 Regulates Aryl Hydrocarbon Receptor Nuclear Translocation and Target Gene Activation
Shigetoshi Yokoyama, Imhoi Koo, Daisuke Aibara, Yuan Tian, Iain A. Murray, Stephanie L. Collins, Denise M. Coslo, Mari Kono, Jeffrey M. Peters, Richard L. Proia, Frank J. Gonzalez, Gary H. Perdew, Andrew D. Patterson,
Oct 28 2024,
In: Advanced Science
Date: Oct 28 2024
Elevated systemic total bile acids escalate susceptibility to alcohol-associated liver disease
Devendra Paudel, Fuhua Hao, Umesh K. Goand, Sangshan Tian, Anthony M. Koehle, Loi V. Nguyen, Yuan Tian, Andrew D. Patterson, Vishal Singh,
Oct 18 2024,
In: iScience
Date: Oct 18 2024
Effects of Early Life Exposures to the Aryl Hydrocarbon Receptor Ligand TCDF on Gut Microbiota and Host Metabolic Homeostasis in C57BL/6J Mice
Yuan Tian, Bipin Rimal, Jordan E. Bisanz, Wei Gui, Trenton M. Wolfe, Imhoi Koo, Iain A. Murray, Shaneice K. Nettleford, Shigetoshi Yokoyama, Fangcong Dong, Sergei Koshkin, K. Sandeep Prabhu, Peter J. Turnbaugh, Seth T. Walk, Gary H. Perdew, Andrew D. Patterson,
Aug 2024,
In: Environmental health perspectives
Date: Aug 2024
Optimization of Conventionally Processed Biological Samples for STEM-EDS Elemental Quantification
Jennifer L. Gray, Yuan Tian, Gang Ning, Tatum Cutler, Yunzhen Zheng, Andrew D. Patterson,
Jul 24 2024,
In: Microscopy and Microanalysis
Date: Jul 24 2024
Sex Dimorphic Effects of Bile Acid Metabolism in Liver Cancer in Mice
Rachel M. Golonka, Beng San Yeoh, Piu Saha, Yuan Tian, John Y.L. Chiang, Andrew D. Patterson, Andrew T. Gewirtz, Bina Joe, Matam Vijay Kumar,
Jan 2024,
In: CMGH
Date: Jan 2024
Growth Hormone Alters Circulating Levels of Glycine and Hydroxyproline in Mice
Jonathan A. Young, Silvana Duran-Ortiz, Stephen Bell, Kevin Funk, Yuan Tian, Qing Liu, Andrew D. Patterson, Edward O. List, Darlene E. Berryman, John J. Kopchick,
Feb 2023,
In: Metabolites
Date: Feb 2023
Endogenous Tryptophan-Derived Ah Receptor Ligands are Dissociated from CYP1A1/1B1-Dependent Negative-Feedback
Fangcong Dong, Andrew J. Annalora, Iain A. Murray, Yuan Tian, Craig B. Marcus, Andrew D. Patterson, Gary H. Perdew,
Jan 1 2023,
In: International Journal of Tryptophan Research
Date: Jan 1 2023
Intermittent Fasting Promotes White Adipose Browning and Decreases Obesity by Shaping the Gut Microbiota
Guolin Li, Cen Xie, Siyu Lu, Robert G. Nichols, Yuan Tian, Licen Li, Daxeshkumar Patel, Yinyan Ma, Chad N. Brocker, Tingting Yan, Kristopher W. Krausz, Rong Xiang, Oksana Gavrilova, Andrew D. Patterson, Frank J. Gonzalez,
Oct 3 2017,
In: Cell Metabolism
Citations: 570
Ketogenic Diets Alter the Gut Microbiome Resulting in Decreased Intestinal Th17 Cells
Qi Yan Ang, Margaret Alexander, John C. Newman, Yuan Tian, Jingwei Cai, Vaibhav Upadhyay, Jessie A. Turnbaugh, Eric Verdin, Kevin D. Hall, Rudolph L. Leibel, Eric Ravussin, Michael Rosenbaum, Andrew D. Patterson, Peter J. Turnbaugh,
2020,
In: Cell
Citations: 524
Randomized Controlled-Feeding Study of Dietary Emulsifier Carboxymethylcellulose Reveals Detrimental Impacts on the Gut Microbiota and Metabolome
Benoit Chassaing, Charlene Compher, Brittaney Bonhomme, Qing Liu, Yuan Tian, William Walters, Lisa Nessel, Clara Delaroque, Fuhua Hao, Victoria Gershuni, Lillian Chau, Josephine Ni, Meenakshi Bewtra, Lindsey Albenberg, Alexis Bretin, Liam McKeever, Ruth E. Ley, Andrew D. Patterson, Gary D. Wu, Andre...,
Mar 2022,
In: Gastroenterology
Citations: 300
The microbiome modulating activity of bile acids
Yuan Tian, Wei Gui, Imhoi Koo, Philip B. Smith, Erik L. Allman, Robert G. Nichols, Bipin Rimal, Jingwei Cai, Qing Liu, Andrew D. Patterson,
2020,
In: Gut microbes
Citations: 237
Activation of intestinal hypoxia-inducible factor 2α during obesity contributes to hepatic steatosis
Cen Xie, Tomoki Yagai, Yuhong Luo, Xianyi Liang, Tao Chen, Qiong Wang, Dongxue Sun, Jie Zhao, Sadeesh K. Ramakrishnan, Lulu Sun, Chunmei Jiang, Xiang Xue, Yuan Tian, Kristopher W. Krausz, Andrew D. Patterson, Yatrik M. Shah, Yue Wu, Changtao Jiang, Frank J. Gonzalez,
Nov 1 2017,
In: Nature Medicine
Citations: 153
Systems responses of rats to aflatoxin B1 exposure revealed with metabonomic changes in multiple biological matrices
Limin Zhang, Yangfang Ye, Yanpeng An, Yuan Tian, Yulan Wang, Huiru Tang,
Feb 4 2011,
In: Journal of Proteome Research
Citations: 142
Berberine directly affects the gut microbiota to promote intestinal farnesoid X receptor activation
Yuan Tian, Jingwei Cai, Wei Gui, Robert G. Nichols, Imhoi Koo, Jingtao Zhang, Mallappa Anitha, Andrew D. Patterson,
Feb 2019,
In: Drug Metabolism and Disposition
Citations: 113
Bacterial colonization reprograms the neonatal gut metabolome
Kyle Bittinger, Chunyu Zhao, Yun Li, Eileen Ford, Elliot S. Friedman, Josephine Ni, Chiraag V. Kulkarni, Jingwei Cai, Yuan Tian, Qing Liu, Andrew D. Patterson, Debolina Sarkar, Siu H.J. Chan, Costas Maranas, Anumita Saha-Shah, Peder Lund, Benjamin A. Garcia, Lisa M. Mattei, Jeffrey S. Gerber, Michal...,
Jun 1 2020,
In: Nature Microbiology
Citations: 102
Selective metabolic effects of gold nanorods on normal and cancer cells and their application in anticancer drug screening
Limin Zhang, Liming Wang, Yili Hu, Zhigang Liu, Yuan Tian, Xiaochun Wu, Yuliang Zhao, Huiru Tang, Chunying Chen, Yulan Wang,
Sep 2013,
In: Biomaterials
Citations: 90
Erratum
Guolin Li, Cen Xie, Siyu Lu, Robert G. Nichols, Yuan Tian, Licen Li, Daxeshkumar Patel, Yinyan Ma, Chad N. Brocker, Tingting Yan, Kristopher W. Krausz, Rong Xiang, Oksana Gavrilova, Andrew D. Patterson, Frank J. Gonzalez,
Nov 7 2017,
In: Cell Metabolism
Citations: 84
