gloved hands holding a petri dish

Microbiome sciences refers to a multidisciplinary research area investigating the structure, relationships, and functions of microbial communities and their environment (microbiomes). Studying microbiomes provides an understanding of microbe-microbe and host-microbe relationships, and their role in the health of individuals to ecosystems.

Related Faculty

Jordan Bisanz

  • Assistant Professor of Biochemistry and Molecular Biology

The interface of microbiology and bioinformatics, with approaches including genomics and metabolomics to investigate the. . .

Seth Bordenstein

  • Director of the One Health Microbiome Center
  • Huck Chair in Microbiome Sciences

The evolutionary and genetic principles that shape symbiotic interactions between animals, microbes, and viruses and the. . .

Daniel Cosgrove

  • Eberly Chair and Professor of Biology

Mechanism of plant growth. Function and evolution of expansins. Biochemistry and rheology of plant cell walls. Growth. . .

Emily Davenport

  • Assistant Professor of Biology

Understanding the complex relationship humans have with our microbiomes, using high-throughput sequencing technologies and. . .

Francisco Dini-Andreote

  • Huck Early Career Chair in Microbial Community Ecology, Associate Professor of Plant Science

Microbiome, plant-microbe interactions, and community ecology. Harnessing the plant microbiome to enhance protection against. . .

Edward Dudley

  • Professor of Food Science
  • Director of E. coli Reference Center

Mechanisms driving toxin production in Shiga-toxigenic Escherichia coli; use of genome sequencing to track pathogen. . .

Kara Fikrig

  • Assistant Professor of Vector Ecology

The intersection of entomology and public health, with a focus on understanding the drivers and barriers of mosquito. . .

Erika Ganda

  • Emphasis Area Representative, Microbiome Sciences
  • Associate Professor of Food Animal Microbiomes

Developing practical ways to leverage the microbiome to improve food safety and improve food production animals' production. . .

David Geiser

  • Professor of Mycology

Genomics of fungi, applied to the evolution of plant and animal disease, toxin production, and beneficial roles. Fungal. . .

Jessica Grembi

  • Assistant Professor of Pharmacology

The Grembi lab studies the host-microbiota interplay, with a particular focus on the small intestine, where 90% of nutrient. . .

Kevin Hockett

  • Huck Early Career Chair
  • Associate Professor of Microbial Ecology

Biological Control, Biology and Ecology of Plant-Microbe and Plant-Environment Interactions, Microbial Ecology and Population. . .

Christian Huber

  • Associate Professor of Biology

How evolutionary mechanisms such as mutation, recombination, and natural selection shape genetic diversity and the. . .

Seogchan Kang

  • Professor of Plant Pathology & Environmental Microbiology

Genetic and cellular mechanisms underpinning plant-fungal interactions with Arabidopsis thaliana and Fusarium oxysporum as a. . .

Vivek Kapur

  • Huck Distinguished Chair in Global Health
  • Professor of Microbiology and Infectious Diseases

The basic mechanisms by which pathogenic microbes successfully infect, colonize, and cause disease in their hosts.

Joshua Kellogg

  • Emphasis Area Representative, Molecular Toxicology
  • Associate Professor of Veterinary and Biomedical Sciences

Development of new metabolomics tools for chemical and biological characterization of complex systems. Discovery of new. . .

Girish Kirimanjeswara

  • Emphasis Area Representative, Immunology and Infectious Disease
  • Associate Professor of Veterinary and Biomedical Science

Establishing the Virulence Factors

David Koslicki

  • Chair, Intercollege Graduate Degree Program in Bioinformatics and Genomics
  • Associate Professor of Computer Science and Engineering and Biology

Developing efficient algorithms to extract insight from high-throughput sequencing data.

Jasna Kovac

  • Lester Earl and Veronica Casida Career Development Professor of Food Safety
  • Associate Professor of Food Science

Integrating epidemiological, microbiological, molecular and omics methods to better understand microbial pathogenic. . .

Todd LaJeunesse

  • Professor of Biology

Microbial Ecology and Evolution

Elizabeth McGraw

  • Professor and Huck Scholar in Entomology

The genetics of vector, pathogen and symbiont interactions.

Scott Medina

  • Director, Center for Biodevices
  • Korb Early Career Associate Professor of Biomedical Engineering

Design of bio-inspired functional materials that serve as new tools in precision medicine. Understanding how peptides and. . .

Tim Miyashiro

  • Professor of Biochemistry and Molecular Biology

How bacteria adapt to a host environment. The mutualistic symbiosis established between the Hawaiian bobtail squid (Euprymna. . .

Ipsita Mohanty

  • Assistant Professor of Pharmacology

At the Mohanty Lab, we seek to decode the chemical language of the microbiome, uncovering how microbial metabolites act as. . .

Andrew Patterson

  • Associate Director, Huck Institutes of the Life Sciences
  • Professor of Molecular Toxicology

The Patterson lab is focused on understanding the host-metabolite-microbiome axis

Carly Schissel

  • Assistant Professor of Chemistry

The discovery, design, and synthesis of bioactive peptides with unusual amino acids and structures to create novel peptides. . .

Vishal Singh

  • Associate Professor of Nutritional Physiology and Microbiome

Laura Weyrich

  • Professor of Anthropology

Reconstructing ancient oral microbiomes and supporting ancient DNA analysis of past humans, environments, and animals.