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Computational genomics

Faculty in the Bioinformatics and Genomics option of the IBIOS graduate program with research interests in this area.
Name Email/phone Interests include
Acharya, Raj
  • Department Head & Professor, Computer Science & Engineering
  • Director, Advanced Laboratory for Information Systems & Analysis (ALISA)
rua1@psu.edu
814-865-9505
   (University Park)

Novel approaches to manage and analyze gene expression data generated from DNA micro arrays, and integrate these approaches to pharmaceutical research.

Albert, Istvan
  • Assistant Professor of Bioinformatics
iua1@psu.edu
814-865-2281
   (University Park)

Large scale biological data analysis, microarrays and sequence analysis.

Albert, Reka
  • Professor of Physics and Biology
ralbert@phys.psu.edu
814-865-6123
   (University Park)

Biological physics and network modeling.

Altman, Naomi
  • Associate Professor of Statistics
naomi@stat.psu.edu
814-865-3791
   (University Park)

The design and analysis of microarray studies, functional genomics and gene clustering.

Berman, Piotr
  • Associate Professor, Department of Computer Science and Engineering
berman@cse.psu.edu
814-865-1611
   (University Park)

The theory of algorithms and its applications.

Chiaromonte, Francesca
  • Associate Professor of Statistics and Health Evaluation Sciences
chiaro@stat.psu.edu
814-865-7075
   (University Park)

Analysis and modelling of large-scale genomic data.

Lesk, Arthur
  • Professor of Biochemistry and Molecular Biology
aml25@psu.edu
814-865-4743
   (University Park)

Protein evolution. Conformations of antigen-binding sites of immunoglobulins and related proteins.

Li, Jia
  • Associate Professor of Statistics
jiali@psu.edu
814-863-3074
   (University Park)

Comparative genomics.

Lindsay, Bruce
  • Willaman Professor of Statistics
  • Head, Department of Statistics
  • Director, Center for Likelihood Studies
bgl@psu.edu
814-865-1220
   (University Park)

Genometrics

Makova, Kateryna
  • Associate Professor of Biology
kdm16@psu.edu
814-863-1619
   (University Park)

Evolutionary genomics, bioinformatics, human genetics, molecular evolution, population genetics.

Maranas, Costas
  • Donald B. Broughton Professor of Chemical Engineering
costas@psu.edu
814-863-9958
   (University Park)

Development of algorithmic and optimization techniques to support the analysis and redesign of systems at different scales.

Miller, Webb
  • Professor of Biology and Computer Science and Engineering
wcm2@psu.edu
814-865-4551
   (University Park)

Phylogenomics

Nekrutenko, Anton
  • Associate Professor of Biochemistry and Molecular Biology
nekrut@psu.edu
814-865-4752
   (University Park)

Evolution of overlapping reading frames in eukaryotic genomes.

Rosenberger, James (Jim)
  • Professor of Statistics
jlr@psu.edu
814-865-1348
   (University Park)

The design of experiments. Statistical computing methodology and algorithms.

Wang, James
  • Associate Professor of Information Sciences and Technology
wang@ist.psu.edu
814-865-7889
   (University Park)

Visual database search and retrieval; retrieval from large-scale genome databases through pattern recognition.